Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E1415
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Entry
SbBS512_E1415 CDS
T00700
Symbol
oppD
Name
(GenBank) oligopeptide ABC transporter, ATP-binding protein OppD
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc01501
beta-Lactam resistance
sbc02010
ABC transporters
sbc02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
SbBS512_E1415 (oppD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SbBS512_E1415 (oppD)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
SbBS512_E1415 (oppD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbc02000
]
SbBS512_E1415 (oppD)
Transporters [BR:
sbc02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
SbBS512_E1415 (oppD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_29
ATP-synt_ab
ABC_ATPase
DUF87
CbiA
Motif
Other DBs
NCBI-ProteinID:
ACD10290
UniProt:
B2TZZ1
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All DBs
Position
1293707..1294720
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AA seq
337 aa
AA seq
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MSVIETATVPLAQQQADALLNVKDLRVTFSTPDGDVTAVNDLNFSLRAGETLGIVGESGS
GKSQTAFALMGLLAANGRIGGSATFNGREILNLPEHELNKLRAEQISMIFQDPMTSLNPY
MRVGEQLMEVLMLHKNMSKAEAFEESVRMLDAVKMPEARKRMKMYPHEFSGGMRQRVMIA
MALLCRPKLLIADEPTTALDVTVQAQIMTLLNELKREFNTAIIMITHDLGVVAGICDKVL
VMYAGRTMEYGNARDVFYQPVHPYSIGLLNAVPRLDAEGETMLTIPGNPPNLLRLPKGCP
FQPRCPHAMEICSSAPPLEEFTPGRLCACFKPVEELL
NT seq
1014 nt
NT seq
+upstream
nt +downstream
nt
atgagcgtaattgaaactgcaactgtgccgctcgcacaacaacaggctgacgcactgctg
aacgtgaaagatttgcgtgtcacctttagtaccccggacggcgacgtcacggcggtcaat
gatttgaatttttccctacgtgccggagaaacgctgggtattgtaggtgagtctggttcg
ggtaaatcgcaaactgcatttgcgttgatgggcctgttggctgccaacggacgtattggc
ggatcggcaaccttcaatgggcgtgaaatcctcaatttgccagagcatgaactcaataaa
ctgcgcgctgaacaaatctcaatgatttttcaggacccaatgacttcgttgaatccctat
atgcgcgtcggtgagcagttgatggaagtgctgatgctgcataagaacatgagcaaagct
gaggcgtttgaagagtcggtgcggatgctcgatgcggtaaaaatgccggaagcacgtaaa
cgcatgaaaatgtacccgcacgagttttctggtggcatgcgtcagcgagttatgattgcg
atggcattgctatgtcgacctaagctgctgattgcggatgaacccactacagcgctggac
gtcaccgtacaggcgcagatcatgacgctattaaatgaactgaaacgggaatttaatacc
gccatcattatgattacccacgatcttggcgtggtggcggggatctgtgacaaagtgctg
gtaatgtacgccgggcgcacgatggaatatggcaacgcgcgcgatgtcttttatcaaccc
gttcatccttattctatcggtttgctcaacgcggtgccgcgtctcgatgcggaaggtgaa
acaatgttgaccatcccgggtaatccgccaaacctgctgcgattaccgaaaggttgcccg
ttccagccacgttgtccgcatgcgatggaaatttgtagtagcgcaccgccgctggaagag
tttacgcctggccgtctgtgtgcttgctttaaaccggtggaggaactgttatga
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