| Entry |
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| Symbol |
rnb
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| Name |
(GenBank) exoribonuclease II
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| KO |
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| Organism |
sbc Shigella boydii CDC 3083-94 (serotype 18)
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| Brite |
KEGG Orthology (KO) [BR:sbc00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:sbc03016]
SbBS512_E1520 (rnb)
Enzymes [BR:sbc01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
SbBS512_E1520 (rnb)
Transfer RNA biogenesis [BR:sbc03016]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SbBS512_E1520 (rnb)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
complement(1385981..1387915)
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| AA seq |
644 aa
MFQDNPLLAQLKQQLHSQTPRAEGVVKATEKGFGFLEVDAQKSYFIPPPQMKKVMHGDRI
IAVIHSEKERESAEPEELVEPFLTRFVGKVQGKNDRLAIVPDHPLLKDAIPCRAARGLNH
EFKEGDWAVAEMRRHPLKGDRSFYAELTQYITFGDDHFVPWWVTLARHNLEKEAPDGVAT
EMLDEGLVREDLTALDFVTIDSASTEDMDDALFAKALPDDKLQLIVAIADPTAWIAEGSK
LDKAAKIRAFTNYLPGFNIPMLPRELSDDLCSLRANEVRPVLACRMTLSADGAIEDNIEF
FAATIESKAKLVYDQVSDWLENTGDWQPESEAIAEQVRLLAQICQRRGEWRHNHALVFKD
RPDYRFILGEKGEVLDIVAEPRRIANRIVEEAMIAANICAARVLRDKLGFGIYNVHMGFD
PANADALAALLKTHGLHVDAEEVLTLDGFCKLRRELDAQPTGFLDSRIRRFQSFAEISTE
PGPHFGLGLEAYATWTSPIRKYGDMINHRLLKAVIKGETATRPQDEITVQMAERRRLNRM
AERDVGDWLYARFLKDKAGTDTRFAAEIVDISRGGMRVRLVDNGAIAFIPAPFLHAMRDE
LVCSQENGTVQIKGETVYKVTDVIDVTIAEVRMETRSIIARPVA |
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| NT seq |
1935 nt +upstreamnt +downstreamnt
atgtttcaggacaacccgctgctagcgcagcttaaacagcaactgcattcccagacgcca
cgcgctgaaggggtggtaaaagccacagaaaaaggctttggcttcctggaagtcgacgcg
caaaaaagttatttcattccgccgccgcagatgaaaaaagtcatgcatggcgaccgaatt
atcgcggtgatccacagtgaaaaagaacgtgaatccgcagagccagaagaactggttgaa
ccgttcctgactcgtttcgtgggtaaagttcagggcaaaaatgaccgtctggccatcgtt
cctgatcatccactcttaaaagacgccattccttgccgcgcagcccgtggcctgaaccac
gagtttaaagaaggcgactgggcggttgccgaaatgcgccgtcatccgctgaaaggcgat
cgttctttctatgctgaattgacacaatacatcacttttggtgacgaccactttgtaccg
tggtgggttacacttgcgcgccataatctggaaaaagaagcaccagacggcgtcgctacc
gaaatgctcgatgaaggtctggttcgtgaagatctgaccgcgctggattttgtcaccatc
gacagtgccagcacagaagatatggatgacgcccttttcgctaaggcgttgccggatgac
aaacttcagctgattgtggcgattgccgatccaaccgcgtggattgctgaaggcagcaag
ctggacaaagccgcgaaaattcgcgcattcaccaactatctgcctggcttcaacatccct
atgctgcctcgcgagctttctgacgatctctgctcactgcgcgccaatgaagtccgcccg
gtactggcatgccgcatgacgctctccgctgatggcgccattgaagataatatcgaattc
tttgccgccaccatcgaatccaaagcaaagctggtgtatgaccaggtttctgactggctg
gaaaataccggtgactggcagcctgaaagtgaagcaattgccgaacaagtccgtttgcta
gcgcaaatttgccaacgccgcggcgagtggcgtcataaccacgcactggtgtttaaagat
cgcccggattaccgctttattctcggtgaaaaaggtgaagtgctggatatcgtcgccgag
cctcgtcgcattgccaaccgtatcgtcgaagaagcgatgattgccgctaacatttgtgcg
gcccgcgtactgcgcgataagctcggttttggcatctataacgtgcatatgggctttgat
ccggcgaatgccgacgcgctggcagcgttgctgaaaacgcacggtctgcatgtcgatgcc
gaagaagtgctcacgctggacggtttctgcaaactgcgtcgtgaactggacgcgcaacca
actggtttcctcgacagccgcattcgtcgcttccagtcatttgctgaaattagcactgaa
cccggtcctcactttggcctcggtctggaagcatacgccacctggacttcgccgatccgt
aaatatggcgacatgatcaaccaccgtctgctgaaagcggttatcaaaggcgaaactgcg
acgcgcccacaggatgaaatcactgtccaaatggccgagcgtcgccgtctcaaccggatg
gcagaacgtgatgttggtgactggttatacgcacgcttcctgaaagacaaagccgggacc
gacacccgtttcgcagcggaaattgtcgatatcagccgtggcggcatgcgtgtgcgtttg
gttgataacggcgctatcgcctttattccggcacctttcttacacgctatgcgcgatgaa
ctggtttgcagccaggaaaacggcactgtacaaattaaaggtgaaacggtttacaaagta
actgacgttattgacgtcaccattgccgaagtccgcatggaaacccgcagcattattgcg
cgcccggtcgcgtaa |
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