Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E3605
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Entry
SbBS512_E3605 CDS
T00700
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbc03016
]
SbBS512_E3605 (truB)
Enzymes [BR:
sbc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
SbBS512_E3605 (truB)
Transfer RNA biogenesis [BR:
sbc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SbBS512_E3605 (truB)
Prokaryotic type
SbBS512_E3605 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
ACD06716
UniProt:
B2U209
LinkDB
All DBs
Position
3356584..3357528
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AA seq
314 aa
AA seq
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MSRPRRRGRDINGVLLLDKPQGMSSNDALQKVKRIYNANRAGHTGALDPLATGMLPICFG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSAEQLAAALDTFRGDIE
QIPSMYSALKYQGKKLYEYARQGIEVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIYLRRLAVSKYPVERMVTLEHLRELVEQAEQQDIPAAELLDPL
LMPMDSPASDYPVVNLPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGENGKFIGMGEIDDE
GRVAPRRLVVEYPA
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggtcgcgacattaacggcgttttgttgctggataaaccg
cagggtatgtccagcaatgatgcgctgcaaaaagtgaaacggatttataacgccaaccgt
gccgggcataccggtgctctggacccgctggcaactggcatgttgccaatttgcttcggg
gaagcgacgaagttttcccagtatctgctggactccgacaaacgctatcgggtcattgcg
cgtcttggacagcgtaccgatacttctgatgccgacggacaaatcgttgaagaacgtccg
gtaacctttagcgcagagcaactggcggcggcgctggatactttccgtggcgatatcgaa
cagatcccttcgatgtattcagcactgaaatatcagggtaaaaaactgtacgaatatgcg
cgtcagggcattgaagtaccgcgtgaagcgcgcccgattaccgtttatgaattgctgttt
attcgccacgaaggcaatgagctggagctggaaattcactgctcaaaaggcacttatatc
cgcaccatcattgatgacctgggtgaaaaactcggttgtggcgcgcatgttatttacctg
cgtcgtctggcggtaagtaaatatccggttgaacggatggtgaccctggaacatctgcgt
gaactggtcgaacaagccgaacagcaggatattccggctgcggagttacttgatccatta
ctgatgccaatggacagtccagcttcggactacccggtggtgaatcttccgttaacgtct
tctgtttacttcaaaaatggtaacccagttcgtacatccggtgcgccgctggaaggactg
gttcgcgttacagaaggtgagaacggcaagtttatcggtatgggcgaaattgacgatgaa
ggccgcgtcgcgcctcgtcgcctggtggttgaatacccggcgtaa
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integrated database retrieval system
