Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E3805
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Entry
SbBS512_E3805 CDS
T00700
Symbol
rtcR
Name
(GenBank) sigma-54 dependent transcriptional regulator RtcR
KO
K14414
transcriptional regulatory protein RtcR
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbc03000
]
SbBS512_E3805 (rtcR)
Transcription factors [BR:
sbc03000
]
Prokaryotic type
Other transcription factors
Others
SbBS512_E3805 (rtcR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RtcR
Sigma54_activat
Sigma54_activ_2
AAA_5
AAA
Mg_chelatase
AAA_16
NACHT
AAA_22
AAA_30
AAA_7
AAA_2
AAA_33
AAA_14
AAA_19
T2SSE
ATPase_2
ResIII
TsaE
NB-ARC
MCM
Motif
Other DBs
NCBI-ProteinID:
ACD07956
UniProt:
B2U3N0
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Position
3534073..3535671
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AA seq
532 aa
AA seq
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MRKTVAFGFVGTVLDYAGRGSQRWSKWRPTLCLCQQESLVIDRLELLHDARSCSLFETLK
RDIASVSPETEVVSIEIELHNPWDFEEVYACLHDFARGYKFQPEKEDYLIHITTGTHVAQ
ICWFLLAEARYLPARLIQTSPPRKKEQPRGAGEVTIIDLDLSRYNAIASRFAEERQQTLD
FLKSGIATRNPHFNRMIEQIEKVAIKSRAPILLNGPTGAGKSFLARRIFELKQARHQFSG
AFVEVNCATLRGDTAMSTLFGHVKGAFTGARESREGLLRSANGGMLFFDEIGELGADEQA
MLLKAIEEKTFYPFGSDRQVSSDFQLIAGTVRDLRQLVAEGKFREDLYARINLWTFTLPG
LRQRQEDIEPNLDYEVERHATLTGDSVRFNTEARRAWLAFATSPQATWRGNFRELSASVT
RMATFATSGRITLDVVEDEINRLRYNWQESRPSALTALLGAEAENIDLFDRMQLEHVIAI
CRQAKSLSAAGRQLFDVSRQGKASVNDADRLRKYLARFGLTWEAVQDQHSSS
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgcgtaaaacagtagcttttggctttgtcggaacggtgctggattatgccgggcgcggc
agtcagcgctggtcaaaatggcgtccgacactctgtttatgccagcaagaatcgttggtc
atcgatcgactggaattattgcatgacgcccgctcgtgctcgctatttgaaacgcttaaa
cgcgatatcgccagcgtttcgccagaaacagaagtggtgagcattgagattgaactgcat
aacccgtgggatttcgaagaggtttacgcctgcctgcatgatttcgcccgtggttacaag
tttcagccagaaaaagaagactatttaattcacatcaccaccggcacccacgtcgcgcag
atttgctggtttctgctggcggaagcgcgttatctacccgcccggttgatacaaacttca
ccaccgcgcaaaaaagaacaaccgcgcggtgccggtgaagtgacgattatcgatctcgat
ctaagccgttataacgccatcgccagccgctttgccgaggaacgccagcaaacgcttgat
tttcttaagtccggcattgccacgcgtaacccccacttcaaccgcatgattgagcagatt
gaaaaagtggcgattaaatcccgcgcaccgatcctgcttaacggcccaaccggtgcggga
aagtcatttctggcgcgacgtatatttgaattaaaacaggcgcggcatcagtttagcggc
gcgtttgtggaagtgaactgcgccaccctgcgcggcgataccgccatgtcgacgctgttt
ggtcatgtgaaaggcgcgtttaccggggcgcgggaatctcgtgaaggtttattacgcagc
gccaacggcggaatgttgttttttgatgagattggcgaactgggcgcagacgaacaggca
atgctgctaaaagccattgaagagaaaaccttttacccgtttggcagcgatcgccaggtg
agcagtgattttcagcttatcgccggaacggtgcgcgatttgcgccagctggttgccgaa
ggcaaatttcgcgaagatctgtacgcgcggatcaatctctggaccttcaccctgccgggt
ctacgccagcgccaggaagatattgaaccgaaccttgattatgaagtggagcgccacgcc
acactcactggcgacagcgtgcgttttaacaccgaagcgcggcgcgcctggttggctttt
gcgacctctccccaggcaacatggcgcggtaactttcgcgaactttctgccagcgtcacg
cggatggccacctttgccactagcggacgcatcactctggacgtggttgaagatgagata
aaccgtctgcgctataactggcaggagagccgcccctccgcgcttacggcgttgctgggc
gcagaggcagaaaacatcgatctcttcgaccgtatgcaactggaacacgttatcgctatc
tgccgccaggcaaagtcgctttctgcagccggacgacagctttttgatgtttcgcgccag
ggcaaagccagcgtcaatgacgcggatcggctacgcaaatacctggcgcgttttggtctg
acgtgggaagccgtgcaggatcagcacagctccagttga
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