Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E3861
Help
Entry
SbBS512_E3861 CDS
T00700
Symbol
rpoH
Name
(GenBank) alternative sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbc03021
]
SbBS512_E3861 (rpoH)
Transcription machinery [BR:
sbc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SbBS512_E3861 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_10
UCR_14kD
HTH_25
HTH_3
SANT_DAMP1_like
WASH_WAHD
2Fe-2S_thioredx
Motif
Other DBs
NCBI-ProteinID:
ACD06666
UniProt:
B2U4D1
LinkDB
All DBs
Position
3586604..3587458
Genome browser
AA seq
284 aa
AA seq
DB search
MTDKMQSLALAPVGNLDSYIRAANAWPMLSADEERALAEKLHYHGDLEAAKTLILSHLRF
VVHIARNYAGYGLPQADLIQEGNIGLMKAVRRFNPEVGVRLVSFAVHWIKAEIHEYVLRN
WRIVKVATTKAQRKLFFNLRKTKQRLGWFNQDEVEMVARELGVTSKDVREMESRMAAQDM
TFDLSSDDDSDSQPMAPVLYLQDKSSNFADGIEDDNWEEQAANRLTDAMQGLDERSQDII
RARWLDEDNKSTLQELADRYGVSAERVRQLEKNAMKKLRAAIEA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgactgacaaaatgcaaagtttagctttagccccagttggcaacctggattcctacatc
cgggcagctaacgcgtggccgatgttgtcggctgacgaggagcgggcgctggctgaaaag
ctgcattaccatggcgatctggaagcagctaaaacgctgatcctgtctcacctgcggttt
gttgttcatattgctcgtaattatgcgggctatggcctgccacaggcggatttgattcag
gaaggtaacatcggcctgatgaaagcagtgcgccgtttcaacccggaagtgggtgtgcgc
ttggtctccttcgccgttcactggatcaaagcagagatccacgaatacgttctgcgtaac
tggcgtatcgtcaaagttgcgaccaccaaagcgcagcgcaaactgttcttcaacctgcgt
aaaactaagcagcgtctgggctggtttaaccaggatgaagtcgaaatggtggcccgtgaa
ctgggcgtaaccagcaaagacgttcgtgagatggaatcacgtatggcggcacaggacatg
acctttgacctgtcttccgacgacgattccgacagccagccgatggcaccggtgctctat
ctgcaggataaatcatctaactttgccgacggcatcgaagatgataactgggaagagcag
gcggcaaaccgtctgaccgacgcgatgcaaggtctggacgaacgcagccaggacatcatc
cgcgcgcgctggctggacgaagacaacaagtccacgttgcaggaactggctgaccgttac
ggtgtttccgctgaacgtgtacgccagctggaaaagaacgcgatgaaaaaactgcgcgct
gctatagaagcgtaa
DBGET
integrated database retrieval system
