Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4418
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Entry
SbBS512_E4418 CDS
T00700
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
SbBS512_E4418 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbc03400
]
SbBS512_E4418 (priA)
Enzymes [BR:
sbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
SbBS512_E4418 (priA)
DNA repair and recombination proteins [BR:
sbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
SbBS512_E4418 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA-like_WH
DEAD
PriA_C
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
Zn_ribbon_6
AAA_19
AAA_22
TrwB_AAD_bind
Motif
Other DBs
NCBI-ProteinID:
ACD08878
UniProt:
B2TWD2
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All DBs
Position
complement(4120718..4122916)
Genome browser
AA seq
732 aa
AA seq
DB search
MPVAHVALPVPLPRTFDYLLPEGMTVKAGCRVRVPFGKQQERIGVVVSVSDVSELPLNEL
KAVVEVLDVEPVFTHSVWRLLLWAADYYHHPIGDVLFHALPILLRQGRPAANAPMWYWFA
TEQGQAVDLNSLKRSPKQQQALAALRQGKIWRDQVATLEFNDAALQALRKKGLCDLASET
PEFSDWRTNYAVSGERLRLNTEQATAVGAIHSAADTFSAWLLAGVTGSGKTEVYLSVLEN
VLAQGKQALVMVPEIGLTPQTIARFRERFNAPVEVLHSGLNDSERLSAWLKAKNGEAAIV
IGTRSALFTPFKNLGVIVIDEEHDSSYKQQEGWRYHARDLAVYRAHSEQIPIILGSATPA
LETLCNVQQKKYRLLRLTRRAGNARPAIQHVLDLKGQKVQAGLAPALITRMRQHLQANNQ
VILFLNRRGFAPALLCHDCGWIAECPRCDHYYTLHQAQQHLHCHHCDSQRPVPRQCPSCG
STHLVPVGLGTEQLEQTLAPMFPGVPISRIDRDTTSRKGALEQQLAKVHRGGARILIGTQ
MLAKGHHFPDVTLVALLDVDGALFSADFRSAERFAQLYTQVAGRAGRAGKQGEVVLQTYH
PEHPLLQTLLYKGYDAFAEQALAERRMMQLPPWTSHVIVRVEDHNNQHAPLFLQQLRNLI
LSSPLADDKLWILGPVPALAPKRGGRWRWQILLQHPSRVRLQHIISGTLALINTIPDSRK
VKWVLDVDPIEG
NT seq
2199 nt
NT seq
+upstream
nt +downstream
nt
atgcccgttgcccacgttgccttgcccgttccgcttcctcgtacctttgactatctgctg
ccagaaggcatgacggttaaagccgggtgtcgcgtgcgcgtgccgtttggcaaacaacag
gagcgcatcggggttgtggtgtcagttagcgatgtcagtgagctgccgcttaacgagctg
aaagcggtagtggaagtgctggacgttgagccggtatttactcactccgtctggcggtta
ctgctctgggcggcagattactatcatcatccgattggcgatgtgctgtttcatgccttg
ccgattttactgcgccaggggcggcctgcggcgaacgcgccgatgtggtactggtttgcc
actgaacaaggccaggcggtggatctgaacagcctgaaacgctcccccaagcaacaacag
gcgctggcggcgttacggcaaggcaaaatctggcgcgaccaggtcgccacgctcgaattt
aatgatgccgcgttgcaggcgctacgcaaaaaaggtctgtgtgatttagcaagtgaaaca
ccagagtttagcgactggcgaacgaactatgccgtttctggtgagcggttgcgattgaat
accgaacaggccaccgccgttggcgcaattcatagcgcggcagatactttttctgcctgg
ctgctggcgggcgttaccggttccggtaaaacggaggtttatctcagtgtactggaaaac
gtgctcgctcagggcaaacaggcgctggtgatggtgccggaaatcggcctgacaccgcaa
actatcgcccgttttcgtgaacgttttaatgcccccgtggaagttctgcattccggcctg
aacgacagcgagcggctttcggcgtggttgaaagcgaaaaatggcgaggcggcgattgtg
atcggcacccgctccgcgctgtttacgccgtttaaaaatctcggcgtgattgtcattgat
gaagagcacgacagctcctacaagcagcaggaaggctggcgctatcatgcccgcgacctg
gcggtgtatcgtgcgcacagcgagcaaatcccgattattcttggctccgcaacgcccgcg
ctggaaacgttatgcaacgtccagcagaaaaaataccgcctgctgcgcctgacccgtcgg
gcagggaatgcgcgtccggcaattcaacatgtgctggatttaaaaggtcagaaggtgcag
gcaggtctggctccggcgttaatcacccgtatgcgccagcatttacaggccaacaatcag
gttatcctctttcttaatcgtcggggttttgcgcctgcgctgctgtgccacgactgcggc
tggatagccgaatgcccacgttgcgatcactactacacgctgcatcaggcgcaacagcat
ttgcactgtcaccactgtgacagtcagcgtccggtgccgcgccagtgcccttcctgcggt
tccacgcacctggtccccgtggggctgggcaccgaacagcttgaacagacgcttgcgccg
atgttccccggcgtgcccatttcacgtatcgaccgcgataccaccagccgcaaaggggcg
ctggaacagcaactggcgaaagtgcatcgcggcggcgcgaggattttgatcggcacacaa
atgctggcgaaaggtcaccactttccggatgtgacgctggtggcgttactggatgtggac
ggcgcgctgttttctgccgattttcgctcggcagaacgtttcgcccagctttacacccag
gtcgccggtcgtgccgggcgtgcgggtaaacagggcgaagtggtgctgcaaacgtaccat
ccggaacatcctctgttgcaaacgttgctctataaaggctacgacgcctttgccgaacag
gcgctggctgagcgacgcatgatgcagctgccgccgtggaccagccatgtgattgtgcgt
gtggaagatcataacaatcagcacgcgccgctgttcctgcaacaactgcgtaatctgatc
ctttccagcccgctggcagacgacaaactgtggattctcggcccggttccggctctggca
cctaagcgtggtggccgctggcgctggcagatcttgttgcagcacccttcccgcgtgcgc
ttgcaacacatcattagtggtacgctggcgcttattaatacaataccggattcccgcaag
gtgaaatgggtgttggatgtcgatcccatcgaaggctaa
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integrated database retrieval system
