Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4553
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Entry
SbBS512_E4553 CDS
T00700
Symbol
dinF
Name
(GenBank) DNA-damage-inducible protein F
KO
K26937
MATE family, multidrug efflux pump
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbc02000
]
SbBS512_E4553 (dinF)
Transporters [BR:
sbc02000
]
Solute carrier family (SLC)
SLC47: Multidrug and Toxin Extrusion (MATE) family
SbBS512_E4553 (dinF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
MatE
DUF7775
Motif
Other DBs
NCBI-ProteinID:
ACD10338
UniProt:
B2TX72
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All DBs
Position
complement(4255194..4256573)
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AA seq
459 aa
AA seq
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MPPGVAVCFSSLFIRLVCMAFLTSSDKALWHLALPMIFSNITVPLLGLVDTAVIGHLDSP
VYLGGVAVGATATSFLFMLLLFLRMSTTGLTAQAYGAKNPQALARALVQPLLLALGAGAL
IALLRTPIIDLALHIVGGSEAVLEQARRFLEIRWLSAPASLANLVLLGWLLGVQYARAPV
ILLVVGNILNIVLDVWLVMGLHMNVQGAALATVIAEYATLLIGLLMVRKILKLRGISGEM
LKTAWRGNFRRLLALNRDIMLRSLLLQLCFGAITVLGARLGSDIIAVNAVLMTLLTFTAY
ALDGFAYAVEAHSGQAYGARDGSQLLDVWRAACRQSGIVALLFSVVYLLAGEHIIALLTS
LTQIQQLADRYLIWQVILPLVGVWCYLLDGMFIGATRAAEMRNSMAVAAAGFALTLLTLP
WLGNHALWLALTVFLALRGLSLAAIWRRHWRNGTWFAAT
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgccgccaggcgtcgcggtttgtttttcatctctcttcatcaggcttgtctgcatggca
ttcctcacttcatctgataaagcactctggcatctcgccttacccatgattttctccaat
atcaccgttccgttgctgggactggtcgatacggcggtaattggtcatcttgatagtcca
gtttatttgggcggcgtggcggttggtgcaacggcgaccagctttctctttatgctgttg
ctgtttttacgcatgagcaccaccgggctgactgcgcaggcttatggtgccaaaaatcct
caggcattagcccgtgcgctggtgcaaccgttgctgttggcgttgggggcaggggcgtta
attgcgctgctgcgtacaccgattatcgatctggcactgcatattgttggcggtagtgaa
gcagtcctggaacaggcgcggcgctttcttgaaatccgctggttaagcgcaccggcgtcg
ctggcgaatctggtattacttggttggttactcggcgtgcaatatgcccgtgcgccagta
attttgttagtggtcggcaatatcctcaacattgtgctggatgtctggctggtgatgggg
ctgcatatgaacgtgcagggcgcggcgctggcgacggttattgcggaatatgcaacattg
ctgattggtctgctaatggtgcgtaaaatcctcaaactacgcggaatttccggcgaaatg
ctgaaaactgcctggcgaggaaacttccgtcgcttgctggcgcttaaccgcgatatcatg
ctgcgttcgctgttgttgcaactctgtttcggcgcgatcaccgtacttggtgcgcgactg
gggagtgacattatcgctgttaacgcggttctgatgacgctactcacctttaccgcctat
gcgctggatggttttgcctacgcggttgaagcgcattccggtcaggcgtacggtgcgcgc
gacggtagccagttgctggatgtctggcgggcagcgtgccgccagtcggggatcgtagcg
ttactgttttcggtagtttatttgctggcaggggaacacatcattgcgttgctgacgtcg
ttaacccagattcagcagctggccgaccgctatcttatctggcaggtgattttgccgttg
gttggcgtctggtgttatctgctggacggcatgtttataggcgcaacgcgcgcagccgaa
atgcgtaacagtatggcggtggccgccgcaggttttgcgttgacgctccttacgctgccg
tggctgggtaatcatgctttgtggctggcgttaaccgtctttctggcgttgcgcgggctt
tctctggcggctatctggcggcgtcactggcgcaacggtacctggtttgccgcaacgtga
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