Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4672
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Entry
SbBS512_E4672 CDS
T00700
Symbol
groL
Name
(GenBank) chaperonin GroL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SbBS512_E4672 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbc03019
]
SbBS512_E4672 (groL)
03110 Chaperones and folding catalysts [BR:
sbc03110
]
SbBS512_E4672 (groL)
03029 Mitochondrial biogenesis [BR:
sbc03029
]
SbBS512_E4672 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbc04147
]
SbBS512_E4672 (groL)
Enzymes [BR:
sbc01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
SbBS512_E4672 (groL)
Messenger RNA biogenesis [BR:
sbc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
SbBS512_E4672 (groL)
Chaperones and folding catalysts [BR:
sbc03110
]
Heat shock proteins
HSP60 / Chaperonin
SbBS512_E4672 (groL)
Mitochondrial biogenesis [BR:
sbc03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
SbBS512_E4672 (groL)
Exosome [BR:
sbc04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
SbBS512_E4672 (groL)
Exosomal proteins of other body fluids (saliva and urine)
SbBS512_E4672 (groL)
Exosomal proteins of breast cancer cells
SbBS512_E4672 (groL)
Exosomal proteins of colorectal cancer cells
SbBS512_E4672 (groL)
Exosomal proteins of bladder cancer cells
SbBS512_E4672 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACD10522
UniProt:
B2TY18
LinkDB
All DBs
Position
4367510..4369156
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AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI
DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG
TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV
ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA
ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgtgtgaaaatgctgcgcggcgta
aacgtactggcagatgcagtgaaagttaccctcggtccgaaaggccgtaacgtagttctg
gataaatctttcggtgcaccgaccatcaccaaagatggtgtttccgttgctcgtgaaatc
gaactggaagacaagttcgaaaatatgggtgcgcagatggtgaaagaagttgcctctaaa
gcgaacgacgctgcaggcgacggtaccaccactgcaaccgtactggctcaggctatcatc
actgagggtctgaaagcagttgctgcgggcatgaacccgatggacctgaaacgtggtatc
gacaaagctgttaccgctgcagttgaagaactgaaagcgctgtccgtaccatgctctgac
tctaaagcgattgctcaggttggtaccatctccgctaactccgacgaaaccgtaggtaaa
ctgatcgctgaagcgatggacaaagtcggtaaagaaggcgttatcaccgttgaagacggt
accggtctgcaggacgaactggacgtggttgaaggtatgcagttcgaccgtggctacctg
tctccttacttcatcaacaagccggaaactggcgcagtagaactggaaagcccgttcatc
ctgctggctgacaagaaaatctccaacatccgcgaaatgctgccggttctggaagccgtt
gctaaagcaggtaaaccgctgctgatcatcgctgaagatgttgaaggcgaagcgctggca
actctggttgttaacaccatgcgtggcatcgtgaaagttgctgcggttaaagctccgggc
ttcggcgatcgccgtaaagctatgctgcaggatatcgcaaccctgactggcggtaccgta
atctctgaagagatcggtatggagctggaaaaagcaaccctggaagacctgggtcaggct
aaacgtgttgtgatcaacaaagacaccaccaccatcattgatggcgtgggtgaagaagct
gcaatccagggccgtgttgctcagatccgtcagcagattgaagaagcaacttctgactac
gaccgtgaaaaactgcaggagcgcgtagcgaaactggcaggcggcgttgcagttatcaaa
gtaggtgctgctaccgaagttgaaatgaaagagaaaaaagcacgcgttgaagatgccctg
cacgcgacccgtgctgcggtagaagaaggcgtggttgctggtggtggtgttgcgctgatc
cgcgtagcgtctaaactggctgacctgcgtggtcagaacgaagaccagaacgtgggtatc
aaagttgcactgcgtgcaatggaagctccgctgcgtcagatcgtattgaactgcggcgaa
gaaccgtctgttgttgctaacactgttaaaggcggcgacggcaactacggttacaacgca
gcaaccgaagaatacggcaacatgatcgacatgggtatcctggatccaaccaaagtaacc
cgttctgctctgcagtacgcggcttctgtggctggcctgatgatcaccaccgagtgcatg
gttaccgacctgccgaaaaacgatgcagctgacttaggcgctgctggcggtatgggcggc
atgggtggcatgggcggcatgatgtaa
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