Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4817
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Entry
SbBS512_E4817 CDS
T00700
Name
(GenBank) conserved hypothetical protein
KO
K06915
DNA double-strand break repair helicase HerA and related ATPase
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbc03400
]
SbBS512_E4817
DNA repair and recombination proteins [BR:
sbc03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
SbBS512_E4817
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HerA_C
DUF87
AAA_22
AAA_10
TrwB_AAD_bind
ResIII
AAA_16
FtsK_SpoIIIE
SLFN-g3_helicase
AAA_30
T2SSE
AAA
AAA_7
AAA_19
Hydrolase
CbiA
SRP54
AAA_18
AAA_28
NTPase_1
ORC-CDC6-like
nSTAND3
AAA_25
AAA_6
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ACD06572
UniProt:
B2TYY1
LinkDB
All DBs
Position
4488321..4489823
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AA seq
500 aa
AA seq
DB search
MSEPLLIARTPDTELFLLPGMANRHGLITGATGTGKTVTLQKLAESLSEIGVPVFMADVK
GDLTGIAQAGTASEKLLTRLKNIGVNDWQPHANPVVVWDIFGEKGHPVRATVSDLGPLLL
ARLLNLNDVQSGVLNIIFRIADDQGLLLLDFKDLRAITQYIGDNAKSFQNQYGNISSASV
GAIQRGLLSLEKQGAAHFFGEPMLDIKDWMRTDTNGKGVINILSAEKLYQMPKLYAASLL
WMLSELYEQLPEAGDLEKPKLVFFFDEAHLLFNDAPQVLLDKIEQVIRLIRSKGVGVWFV
SQNPSDIPDNVLGQLGNRVQHALRAFTPKDQKAVKAAAQTMRANPAFDTEKAIQELGTGE
ALISFLDAKGSPSVVERAMVIAPCSRMGPVTEDERNGLINHSPVYGKYEDDVDRESAYEM
LQKGFQASTKQQNNPPAKGKAVAVDDGILGGLKDILFGTTGPRGGKKDGVVQTMAKSAAR
QVTNQIVRGMLGSLLGGRRR
NT seq
1503 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccctattaattgcccgcacgccggacacagaactttttttactgccggga
atggctaaccgtcacgggctgattactggcgcaacggggacgggtaaaaccgttacgctg
caaaaactggcagagtcattgtcggaaatcggcgtgccggtgtttatggctgatgtgaaa
ggcgatctgaccggtatcgcgcaggcaggaacggcgtcggaaaaactgctcacaaggctt
aaaaatatcggcgtcaatgactggcaaccgcatgctaatccggtggtggtgtgggatatc
tttggcgagaaaggccatccggtgcgggcgacggtttcagacctggggccgctgttgctg
gcgcggctgttgaatctcaacgatgtgcaatctggcgtgctgaatatcatcttccgtatt
gctgacgatcagggattgttgctgctcgactttaaagatctgcgggcgattacccagtac
atcggcgataacgccaaatctttccagaatcagtacggtaatatcagtagcgcatcggtt
ggtgccatccagcgcggtttactgtcgctggaaaagcaaggtgcggcgcatttctttggc
gagccgatgctggatatcaaagactggatgcgcaccgataccaacggtaaaggcgttatc
aatatcctcagcgccgagaagctttatcagatgccgaaactgtacgccgccagcctgctg
tggatgctttcagagttgtatgaacaattgccggaagcgggcgatctggagaaaccaaaa
ctggtgtttttcttcgacgaggcacatctgctgtttaacgatgcaccgcaggtactgctg
gataagattgagcaggtaataaggcttattcgctcaaaaggcgtgggcgtctggttcgtt
tcgcaaaacccgtctgatattccggataatgtgctcgggcagctcggtaatcgcgttcaa
cacgctttgcgggcttttacgcccaaagatcagaaagcggtaaaagctgcggcgcaaacc
atgcgggccaatccggcgtttgataccgaaaaggcaatccaggaactggggaccggcgag
gcgttaatctcgtttctcgatgcaaaaggaagtccttctgtggtggaacgggcgatggtg
attgcgccttgttcgcggatgggaccggtgacggaagatgagcgcaatggcttgattaac
cactccccggtgtatggcaagtacgaggatgacgtggaccgggaatccgcctatgagatg
ttgcaaaaaggctttcaggccagtaccaagcagcaaaataatcctcccgcgaaagggaaa
gcggtggcggtggatgacggtattcttggtggattgaaggatattttgtttggcactacc
ggaccacgcggcgggaagaaagatggtgtggtgcaaacaatggcgaaaagcgccgcccgc
caggtgacgaatcagattgtacgtgggatgttggggagtttgctggggggaagaagaagg
taa
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