Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E4842
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Entry
SbBS512_E4842 CDS
T00700
Symbol
treR
Name
(GenBank) trehalose operon repressor
KO
K03485
LacI family transcriptional regulator, trehalose operon repressor
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbc03000
]
SbBS512_E4842 (treR)
Transcription factors [BR:
sbc03000
]
Prokaryotic type
Helix-turn-helix
LacI family
SbBS512_E4842 (treR)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LacI
Peripla_BP_3
Peripla_BP_1
HTH_23
HTH_3
HTH_31
HTH_IclR
HTH_7
MarR_2
HTH_Tnp_ISL3
AAA_18
HTH_28
HTH_Crp_2
HTH_26
CENP-B_N
MarR
TrmB
HHH
HTH_AraC
HTH_38
HTH_17
Peripla_BP_4
Motif
Other DBs
NCBI-ProteinID:
ACD06755
UniProt:
B2TZ02
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All DBs
Position
4512438..4513403
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AA seq
321 aa
AA seq
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MQNRLTIKDIARLSGVGKSTVSRVLNNESGVSQRTRERVEAVMNQHGFSPSRSARAMRGQ
SDKVVAIIVTRLDSLSENLAVQTMLPEFYEQGYDPIMMESQFSPQLVAEHLGVLKRRNID
GVVLFGFTGITEEMLAHWQSSLVLLARDAKGFASVCYDDEGAIKILMQRLYDQGHRNISY
LGVPHSDVTTGKRRHEAYLAFCKAHKLHPVAALPGLAMKQGYENVAKVITPETTALLCAT
DTLALGASKYLQEQRIDTLQLASVGNTPLIKFLHPEIVTVDPGYAEAGRQAACQLIAQVT
GRSEPQQIIIPATLSRSFPER
NT seq
966 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaatcggctgaccatcaaagacatcgcgcgcttaagcggcgtggggaaatctaca
gtttcccgggtgctgaataacgaaagcggcgtgagccagcgcacccgcgagcgtgttgaa
gcagtgatgaatcagcatggattttccccttcccgctctgcgcgcgctatgcgtgggcaa
agcgataaagtggtcgccatcattgttacccgcctggattcgttgtcagaaaatctcgcc
gttcaaaccatgctgccagagttctatgaacaaggttacgacccaatcatgatggaaagt
cagttttccccgcaattagttgccgaacatttgggggtgctgaaacggcgtaatatcgac
ggcgtagtgctgttcggttttaccggcataacagaagaaatgttagcccactggcagtca
tcgctggttctgctggcgcgtgacgcaaaaggctttgcttcggtctgttatgacgacgaa
ggggcaatcaagatcctgatgcaacggctgtatgaccaggggcatcgtaatatcagttat
ctcggcgtgccgcacagtgacgtgacgaccggtaagcgacgtcacgaagcctacctggcg
ttctgcaaagcgcataaactgcatcccgttgccgctctgccaggccttgctatgaagcaa
ggctatgagaacgtagcaaaagtgattacgcctgaaactaccgccttactgtgcgcaacc
gacacgctggcacttggcgcaagtaaatacctgcaagagcaacgcatcgacaccttgcaa
ctggcgagcgtcggtaatacgccgttaataaaattcctccatccggagatcgtcaccgta
gatcccggttacgccgaagctggacgccaggcggcctgccagttgatcgcacaggtaacc
gggcgcagcgaaccgcaacaaatcatcatccccgccaccctgtccagatcgtttcctgaa
cgataa
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