Sphingobium baderi: ATN00_02250
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Entry
ATN00_02250 CDS
T04194
Name
(GenBank) DNA-directed RNA polymerase subunit omega
KO
K03060
DNA-directed RNA polymerase subunit omega [EC:
2.7.7.6
]
Organism
sbd
Sphingobium baderi
Pathway
sbd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
ATN00_02250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sbd03021
]
ATN00_02250
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_02250
Enzymes [BR:
sbd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
ATN00_02250
Transcription machinery [BR:
sbd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
ATN00_02250
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
ATN00_02250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb6
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ALR19298
UniProt:
A0A0S3EV84
LinkDB
All DBs
Position
complement(426564..426908)
Genome browser
AA seq
114 aa
AA seq
DB search
MARVTVEDCVDKVTNRFDLVLLAAQRAREISGGAELTLDRDRDKNPVVALREIAEETVLP
VDLQDSLVGSLQKVQIDDDDTPDEIGSIAQSAEALRLTAAAPPRNQNIGGDYDG
NT seq
345 nt
NT seq
+upstream
nt +downstream
nt
ttggcccgagttaccgtcgaagattgcgtcgacaaggttaccaaccgttttgatctcgtc
cttcttgcggcgcagcgcgcgcgcgagatttccggcggtgcggaactgacccttgatcgc
gaccgcgacaagaatccggtcgtcgccctgcgcgagatcgcggaagaaaccgtcctgccc
gtggatcttcaggattcgctcgtcggctcgctgcaaaaggtgcagatcgatgacgacgac
acgcccgatgaaatcggttcgatcgcccagtcggcggaggcgctgcgcctgaccgccgcc
gcgccgccgcgcaaccagaatatcggcggcgattacgacggctga
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