Sphingobium baderi: ATN00_02885
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Entry
ATN00_02885 CDS
T04194
Name
(GenBank) phenylalanine--tRNA ligase subunit beta
KO
K01890
phenylalanyl-tRNA synthetase beta chain [EC:
6.1.1.20
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
ATN00_02885
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
sbd01007
]
ATN00_02885
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbd03016
]
ATN00_02885
Enzymes [BR:
sbd01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.20 phenylalanine---tRNA ligase
ATN00_02885
Amino acid related enzymes [BR:
sbd01007
]
Aminoacyl-tRNA synthetase
Class II (U)
ATN00_02885
Transfer RNA biogenesis [BR:
sbd03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
ATN00_02885
Prokaryotic type
ATN00_02885
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
B3_4
tRNA_synthFbeta
tRNA_bind
FDX-ACB
B5
Motif
Other DBs
NCBI-ProteinID:
ALR19406
UniProt:
A0A0S3EVD8
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All DBs
Position
562736..565126
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AA seq
796 aa
AA seq
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MKFTLSWLKTHLDTDADLSAILKTLNDIGLEVEDVENPAEKLGAFRIAKVLTAERHPQAD
KLQVLTVDQGDGHPLQVVCGAPNARAGLVGVFGVEGAVVPVNGMVLKKTAIRGIESNGMM
CSFRELELGEDHDGIIELAEDAPVGQVYATWAGLDDPVIDVSITPNRQDCMGVRGIARDL
AAAGLGTMKPLAIPVVEGSGPGPDVRTDDVEGCPAFFARTVRGVANGRSPEWMARRLKAV
GQKPISTLVDITNYVMIDLGRPLHVYDMATLKGGLVARKGKAGEEVLALNGKTYTVDETM
TVIADDAAVHDIGGIMGGEHSGATDATTDVLIECAWFTPERIAVTGQKLALTSDARGRFE
RGVDPAFLDDGLSIATDLVVKLCGGTPSEPTRAGTPPLTPRTISYDPAQCLALAGVDVAA
DEQQRILESLGFGVAGEAGAWTITVPTWRRDVDGWPDIVEEVVRIVGLDKVPSTPLPRAP
GVARPTATAEQMVERRVRRTAAARGLAEAINWSFLSEKEAASVGGGDWTLANPISEELKV
MRPSLLPGLLSATRRNMDRGATSVRLFELGRRYFTGQKDGSWERATVGFVLAGEKTPRGW
QTGKAQPFGAHDAKAEVTALLAAAGAPVANLQSFGEASGAYHPGQSGTLRLGPKTVLAEY
GVLHPSLARLFGLTGTVVAGEIFLDAIPTKRRTGFMRAPYAPPALQAVKRDFAFLVPQAL
EADALVRAVRGADKKAIVEARLFDMFVGPGVEEGHKSLAVEVTLQPGEKSFSQEELDAIS
SAVVKAAEKLGGTLRG
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgaagttcaccctttcctggctcaagacgcatctggataccgatgcggacctgtccgcc
atactcaagacgctgaacgacatcggccttgaggtcgaagatgtggaaaacccggcggaa
aagcttggcgcgttccgcatcgcgaaggtgctgaccgcagagcgccatccgcaggccgac
aagttgcaggtgctgaccgtcgatcagggcgacgggcaccccttgcaggtggtctgcggc
gcgcccaatgcgcgggccgggctggtcggcgtgttcggcgtcgaaggcgcggtggtgccg
gtcaatggcatggtgctgaaaaagaccgccattcgcgggatcgaatcgaacggcatgatg
tgctccttccgcgagctggaactgggcgaggatcatgacggcatcatcgaactggccgag
gacgcgccggtggggcaggtctatgccacatgggcggggcttgatgaccccgtgatcgac
gtgagcatcacgcccaaccggcaggactgcatgggcgtgcgcgggattgcgcgcgatctg
gcggcggcggggctggggacgatgaagccgctcgccattccggtggtcgagggttcaggg
ccggggccggacgtgcggacggacgatgtcgagggctgtcccgccttcttcgcgcggacc
gttcggggcgtagccaacggccggtcgcccgaatggatggcgcggcggctgaaagcggtg
gggcaaaagcccatcagcacgctggtcgacatcaccaactatgtgatgatcgatctggga
cgaccgctgcacgtctacgacatggcgacgctgaaaggcggacttgtcgcgcgcaagggc
aaggcgggcgaggaagtgctggcgctcaacggcaagacctatacggtggacgagacgatg
acggtcatcgccgacgatgcggcggtgcatgacattggcggcatcatggggggcgaacat
tcgggcgccaccgacgccacgaccgatgtgctgatcgaatgcgcctggttcacgccggag
cggatcgccgtcaccgggcagaaactggcgctgacctcagacgcgcgcgggcggttcgag
cgcggggtggacccggccttcctggacgacggcctgtcgatcgcgaccgatctggtggtg
aagctgtgcggcgggacgcccagcgaaccgacccgcgctgggacgccgccgctgacgccc
cgcacgatctcttacgacccggcgcaatgccttgcgctggcgggcgtcgatgtcgccgcg
gacgagcagcagcgcatattggaaagtcttggcttcggcgtggccggagaggcgggcgcg
tggacgatcaccgtgccgacatggcggcgcgacgtggacggctggcccgacatcgtcgag
gaagtcgtgcggatcgtagggctggacaaggtgccctccacgcccctgccccgcgcgccg
ggcgtggcgcggccgactgcgaccgccgaacagatggtcgagcgccgcgtgcgccgcacc
gccgccgcacgggggctggccgaagcgatcaactggtcgttcctctccgaaaaggaagcc
gcatccgtgggcggcggcgactggacgctggccaaccccatttccgaagagctgaaggtc
atgcggccctctctgctgcccggcctgctgtcggccacgcggcgcaacatggatcgcggc
gcgacctccgtgcggctgttcgaactgggacggcgttatttcaccggccagaaggatgga
agctgggaacgcgccaccgtcggcttcgtgctggcgggcgaaaagacgccccgcggctgg
cagacgggcaaggcgcagccgttcggcgcgcatgacgcaaaggccgaggtgaccgccctg
ctcgccgccgccggcgcgccggtcgcgaacctgcaaagcttcggcgaagcgtcgggcgcc
tatcatcccggccagtcgggcacgttgcggcttggccccaagacggtgctggccgaatat
ggcgtgctgcaccccagccttgccaggctgttcgggctgactggcacagtcgtcgcgggc
gagatctttctcgacgcgatcccgacgaagcgcaggacgggcttcatgcgtgccccctat
gcgccgcccgcgctgcaggcggtgaagcgcgacttcgccttcctcgtcccgcaggcgctg
gaagccgacgcgctggtccgcgccgtgcggggcgcggacaagaaggccattgtcgaggcg
cggctgttcgatatgttcgtcgggccgggcgtggaggaagggcacaagtcgctcgccgtc
gaagtgacgttgcagccgggcgaaaagagcttctctcaggaagagctggacgcgatcagc
agcgcagtggtgaaagcggcagagaagctgggcgggacgttgcggggatag
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