Sphingobium baderi: ATN00_04180
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Entry
ATN00_04180 CDS
T04194
Name
(GenBank) AAA family ATPase
KO
K13525
transitional endoplasmic reticulum ATPase
Organism
sbd
Sphingobium baderi
Pathway
sbd04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
ATN00_04180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbd03019
]
ATN00_04180
03009 Ribosome biogenesis [BR:
sbd03009
]
ATN00_04180
04131 Membrane trafficking [BR:
sbd04131
]
ATN00_04180
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbd04147
]
ATN00_04180
Messenger RNA biogenesis [BR:
sbd03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Ran-mediated transport factors
ATN00_04180
Ribosome biogenesis [BR:
sbd03009
]
Eukaryotic type
Pre-60S particles
Ribosome quality control proteins
ATN00_04180
Membrane trafficking [BR:
sbd04131
]
SNARE
SNARE associated proteins
Others
ATN00_04180
Autophagy
Aggrephagy
Other aggrephagy associated proteins
ATN00_04180
Exosome [BR:
sbd04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
ATN00_04180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
AAA_lid_3
CDC48_N
AAA_16
RuvB_N
AAA_22
AAA_5
CDC48_2
AAA_33
AAA_2
AAA_14
NACHT
TIP49
IstB_IS21
nSTAND3
AAA_28
NPHP3_N
RNA_helicase
AAA_18
AAA_30
Mg_chelatase
AAA_7
AAA_24
Sigma54_activat
AAA_11
ABC_tran
AAA_3
TsaE
AAA_19
AAA_17
DUF815
Zeta_toxin
Parvo_NS1
ATPase
AAA_25
NB-ARC
Vps4_C
AAA_lid_PRS2_C
SLFN-g3_helicase
PhoH
bpMoxR
Sigma54_activ_2
Viral_helicase1
MazE_antitoxin
Motif
Other DBs
NCBI-ProteinID:
ALR22368
UniProt:
A0A0S3F3U7
LinkDB
All DBs
Position
827475..829769
Genome browser
AA seq
764 aa
AA seq
DB search
MADQDNAGRRIQVANARPEDAGRGLARLPLAVMAELGLAEGDVVEIAGKRPTPARVVRPY
KEDEGLDVLRLDGLQRANAGVGSGDFVHIRKVELRPAQRVIFAPAQSNLRLQGNPDALKR
VFYQRPLTAGDIVATSGQQQVPPGDMPPQLRQMLAAPAYALQEIRLVVVSTVPKGFVHID
ADTEVELRAEYEEPRDLRRADVTYDDVGGMADAIDQLREMVELPLRYPELFERLGVDPPK
GVLLHGPPGTGKTRLARAVANESEAEFFLINGPEIMGSAYGESEKQLREIFEAATKSAPS
ILFIDEIDSIAPKRGQVTGETEKRLVAQLLTLMDGLEPRTNLVVIAATNRPEAIDEALRR
PGRFDREIIVGVPDERGRREILGIHTRGMPLAEGVDLTELARMTYGFVGADLAALTREAA
IETVRRFMPRLNLEEGIIPPDVLEELSVTRDDFMAAIKRVQPSAMREVMVQAPNIGWGDI
GGLGDAQMRLKEGVELPLKDPDAFRRIGIRPAKGFLLYGPPGTGKTLLAKAVAREAEANF
IATKSSDLLSKWYGESEQQIARLFARARQVAPTVIFIDELDSLVPARGNGLGEPQVTERV
VNTILAEMDGLEELQSVVVIGATNRPTLVDPALLRPGRFDELIYVPVPDEAGRRHILSIH
TKKMPVADDVDLDSLAARTERFTGADLEDLVRRAGLIALRQSLSIEKVGMAQFEAALEET
RASVTPEMEREYEQIQATLKQSVMQVDPIGFVAPGMLNARNRRD
NT seq
2295 nt
NT seq
+upstream
nt +downstream
nt
atggcggatcaggacaatgcagggcgcaggattcaggtggcgaatgcgcggcctgaggat
gcggggcgcggattggcgcgcctgccgctggcagtgatggcggaactgggcctggccgaa
ggcgatgtggtcgagatcgccggcaagcgcccgactcctgcccgcgtggtgcgaccctat
aaggaggatgaagggctggacgtgttgcgccttgatgggttgcagcgcgccaatgcgggc
gtgggctcgggcgatttcgtgcacatccgcaaggtggagctgcgccccgcccagcgggtg
atcttcgcgcctgcacaaagcaatttgcggcttcagggtaatcccgacgccttgaaacgc
gtcttttatcagcggccattgaccgcaggtgacatcgtcgcaacctccggccagcagcag
gtgccgcccggcgatatgccgcctcaactcaggcaaatgctggccgcgccggcttatgcc
ttgcaggaaatccgtctggtggtcgtatcgaccgtacccaagggttttgtccatatcgac
gccgacaccgaagtcgaattgcgcgccgaatatgaagaaccgcgcgacctgcggcgggcc
gatgtcacctatgatgatgtcggtggcatggccgatgcgatcgaccagctgcgcgagatg
gtggagctgccactgcgctatcccgaactgttcgagcggctgggcgtcgatccgcccaag
ggcgtgttgctccatggtccgccaggcaccggcaagacgcggctggcccgcgcggtcgcc
aatgaatcggaagcggaattcttcctcatcaacggcccggaaatcatgggctccgcctat
ggcgaatccgaaaagcagttgcgcgagattttcgaggcggcgaccaagtccgccccatcg
atcctgttcatcgacgaaatcgattccatcgcgcctaagcgggggcaggtaacgggtgag
acggaaaagcgtctcgtcgcgcaattgttgacgctgatggacgggctggagccgcgcacc
aacctcgtcgtcattgccgcgaccaatcggcccgaggcgattgacgaggcgctgcgccgt
ccaggccgtttcgatcgcgaaatcatcgtcggcgttcccgacgaacgcgggcggcgtgag
atattgggtattcacacccgcggcatgcccctggcggagggggtcgacctcaccgaactg
gcgcgcatgacatacggattcgtcggcgccgaccttgctgcgctcacccgtgaggcggcg
atcgagacagtgcgccgtttcatgccgcgcctcaatctggaggaagggatcatcccgccc
gatgtgctggaagagctttccgtcacgcgggatgatttcatggccgcgatcaagcgcgtc
cagccttccgccatgcgcgaggtgatggtgcaggccccgaatatcggctggggcgatata
ggcggccttggcgacgcgcagatgcgcctgaaggaaggggtggagctgccgctgaaagac
ccggatgccttccgccgcatcggcatccgtccggccaagggcttcctgctctacggcccg
cccggcaccggcaagacgctgttggccaaggcggtcgcgcgggaggcggaggcgaacttc
atcgctaccaaatcgtccgatctgctcagcaaatggtatggggagagcgaacagcagatc
gcccgcctcttcgcccgcgcgcggcaggtggcgcccacggtcatcttcatcgatgagctg
gatagcctcgtccccgcgcgaggcaatggccttggtgaaccgcaggtgacggaacgggtg
gtgaacaccatcctcgccgagatggacgggctggaggaactgcaatcggttgtggtcatc
ggcgcgaccaaccggccgacactggtcgatccagcattgctacggccgggccgcttcgac
gagctgatttatgtccccgtgcccgacgaggccgggcggcggcatatcctgtcgatccat
accaagaagatgcctgtggctgacgatgtggatctggattccctcgcggcgcggacggaa
cgcttcaccggcgcggatctggaagatctggtgcgccgcgcgggcctgatcgcgctgcgc
cagtcgctctccatagagaaggttggcatggcccagttcgaggcggcgctggaggaaact
cgcgcatccgtcacgccggagatggaacgcgaatatgagcagatccaggctacgcttaag
caaagcgtgatgcaggtcgatcccatcggctttgtcgcgccgggcatgctgaacgcccgc
aacaggcgcgattga
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