Sphingobium baderi: ATN00_04235
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Entry
ATN00_04235 CDS
T04194
Name
(GenBank) phosphomethylpyrimidine synthase
KO
K03147
phosphomethylpyrimidine synthase [EC:
4.1.99.17
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00730
Thiamine metabolism
sbd01100
Metabolic pathways
sbd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00730 Thiamine metabolism
ATN00_04235
Enzymes [BR:
sbd01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.17 phosphomethylpyrimidine synthase
ATN00_04235
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Gene cluster
GFIT
Motif
Pfam:
ThiC_Rad_SAM
ThiC-associated
Motif
Other DBs
NCBI-ProteinID:
ALR19633
UniProt:
A0A0S3EW22
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All DBs
Position
839048..840907
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AA seq
619 aa
AA seq
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MADIPARTEMRVTTGPIRGSRKIHVGPLKVAMREIALEPGSGEPPVRVYDTSGPYTDPQA
RIDIMAGLPALRRDWIMGRGDVEEYDAREIRPEDNGLKGPDRSGGVQPFPNLVKRPLRAK
PGANVSQMHYARRGIITPEMEYVAERENLGRARLAEYVRDGQDWGAEIPDYVTPEFVRDE
VARGRAIIPSNINHPESEPMAIGRNFLVKINANIGNSAVASDVAAEVDKLVWSIRWGADT
VMDLSTGRNIHDTREWIIRNSPVPIGTVPIYQALEKVGGIAEDLTWDIFRDTLIEQAEQG
VDYFTIHAGVRLPYIPMTAKRVTGIVSRGGSIMAKWCLAHHRESFLYEHFDEITEIMKAY
DIAYSLGDGLRPGSIADANDEAQFAELYTLGELTKRAWEQDVQVMIEGPGHVPMHKIKQN
MDKQLEACGEAPFYTLGPLTTDIAPGYDHITSGIGAAMIGWYGTAMLCYVTPKEHLGLPD
RDDVKVGVVTYKLAAHAADLAKGHPAAKVRDDALSRARFEFRWRDQFNLSLDPDTAEQYH
DQTLPAEGAKSAHFCSMCGPKFCSMKITQEVRDFAAKQNQPATAFIAAEEAEKGMKEMSE
IFRETGSELYMGAGGREHD
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggctgatattcctgctcgcacagagatgcgcgtcaccactggcccgatccgtggatcg
cgcaagattcatgtcggcccgctcaaggtcgccatgcgcgagatcgccctggaaccgggc
agcggcgagccgcccgtccgcgtctacgacacgtccggcccctataccgacccgcaagcc
cgcatcgacatcatggcgggccttcccgcgctgcgccgcgactggatcatgggccggggc
gatgtggaggaatatgacgcccgcgagatcaggcccgaagacaacggcctcaaaggcccc
gaccgttcgggcggcgtccagcccttccccaatctcgtcaagcggcccctgcgcgcgaag
ccgggcgcgaacgtctcgcagatgcactatgcccgccgcggcatcatcacgccggagatg
gaatatgtggccgagcgtgagaatctgggccgtgcccgcctcgccgaatatgtgcgcgac
ggacaggattggggcgcggaaatccccgactatgtgacgcccgaattcgtccgcgatgaa
gtcgcgcgcggccgcgccatcatcccgtccaacatcaaccacccggaatccgagccgatg
gcgatcggccgtaacttcctggtgaagatcaacgccaatatcggcaacagcgccgtcgcc
tccgacgtggcggccgaagttgacaagctcgtctggtcgatccgctggggagcggacacg
gtgatggacctctccacaggccgcaacatccacgacacgcgcgaatggatcatccgcaac
tcgccggtgcccatcggcacggtgcccatctaccaggcgctggaaaaggtcggcggcatc
gccgaggacctgacctgggacatcttccgcgacaccctgatcgagcaggccgagcagggc
gtcgattatttcaccatccatgcgggcgtgcgcctgccctatattccgatgacggcgaag
cgcgtcaccggcatcgtctcgcgcggcgggtcgattatggcgaaatggtgcctcgcccat
catcgcgagagcttcctctacgagcatttcgacgagatcacggagatcatgaaggcctat
gacatcgcctattcgctgggcgacggcctgcgccccggctccatcgccgacgccaatgac
gaagcccagtttgccgaactctacacgctgggcgaactgacgaagcgcgcctgggaacag
gatgtgcaggtgatgatcgaaggaccgggccatgtgccgatgcacaagatcaagcagaat
atggacaagcaattggaagcgtgcggcgaagcgcccttctacacgcttggccccctcacc
accgacattgcgccgggctacgaccatatcacctcaggcatcggcgcggcgatgatcggc
tggtatggcacggcgatgctctgctatgtcacgcccaaggagcatctgggcctgcccgac
cgcgacgacgtgaaggtgggcgtggtgacgtataagctcgccgcccatgccgccgacctg
gcaaagggccatcccgccgccaaggtccgcgacgatgcgctgtcccgcgctcgcttcgaa
ttccgctggcgcgaccagttcaacctgtcgctcgatcccgacacggccgagcaatatcac
gaccagacgcttccggcggaaggggcgaagtcagcccatttctgctccatgtgcggcccc
aaattctgctcgatgaagatcacgcaggaagtgcgcgacttcgcggccaagcagaaccag
cccgccaccgccttcatcgcggcggaagaagcggaaaagggcatgaaggaaatgagcgaa
atcttccgcgaaaccggaagcgagctttatatgggtgctggcgggcgggagcatgattga
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