Sphingobium baderi: ATN00_05565
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Entry
ATN00_05565 CDS
T04194
Name
(GenBank) pseudouridine synthase
KO
K06181
23S rRNA pseudouridine2457 synthase [EC:
5.4.99.20
]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbd03009
]
ATN00_05565
Enzymes [BR:
sbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.20 23S rRNA pseudouridine2457 synthase
ATN00_05565
Ribosome biogenesis [BR:
sbd03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
ATN00_05565
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
ALR19856
UniProt:
A0A0S3EWN7
LinkDB
All DBs
Position
complement(1128778..1129329)
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AA seq
183 aa
AA seq
DB search
MTLILFNKPYGVLCQFTDESTGPPRPTLAAFIDMPGVYPAGRLDLDSEGLLLLTDDGRLQ
ARIADPRFKVPKTYLVQVEGDPDKAALESLRGGLRLKDGPTLPAQVERIEEPALWPRDPP
VRFRKTVPDCWLRLTIREGRNRQVRRMTAAVGHPTLRLVRWRIGDWTLDGIGQGQWREAE
KIG
NT seq
552 nt
NT seq
+upstream
nt +downstream
nt
atgacgctcatcctgttcaacaagccctatggcgtgttgtgccagttcaccgacgaaagc
accggcccgccacgtccgacgctggccgcgttcatcgacatgccgggcgtctatcccgcc
gggcggctggacctcgacagcgaagggttgttgctgctgaccgacgatggccggttacag
gcgcggatcgccgatccccgcttcaaggtgccgaaaacctatctggtgcaggttgaaggt
gatcccgacaaggctgcgctggaatcattgcggggcggcctgcgcctcaaggatggcccg
actttgccagctcaggtcgaacgcatcgaagaaccggcgctctggccgcgcgatccaccg
gttcggtttcgcaagaccgtgccggattgctggctgcgactgacgatccgcgaagggcgc
aaccggcaagtgcggcgcatgacggcagcagtcggacatccgacgctgcggctggtgcgc
tggcgtatcggcgactggacgctcgatggaattggacagggccaatggcgcgaagcggaa
aagatcggctag
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