Sphingobium baderi: ATN00_05730
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Entry
ATN00_05730 CDS
T04194
Name
(GenBank) nucleotide-binding protein
KO
K06958
RNase adapter protein RapZ
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbd03019
]
ATN00_05730
Messenger RNA biogenesis [BR:
sbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ATN00_05730
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PapZ_C
RapZ-like_N
AAA_33
AAA_22
Rad17
AAA_28
YqbF
AAA_18
AAA_16
AAA_30
T2SSE
YfeC-like
Zeta_toxin
AAA_24
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
ALR19885
UniProt:
A0A0S3EWT5
LinkDB
All DBs
Position
complement(1167239..1168180)
Genome browser
AA seq
313 aa
AA seq
DB search
MTSTPAPKTILLVSGLSGAGKTTALKTLEDMGWEVVDNLPLVLLDRLLDTPLPAGHSDAD
ERPLAIGIDARTRGFDANAIVRRIKALREKHGHDVETLFLDCSGSELERRFAETRRRHPL
ALDRPAADGISRERELTEPLRRWASQVIDTTAFSSNALQQEIRNRYTRERLSDPVLTILS
FGFSRGMPRNADLMFDMRYLRNPHWDDALRPKTGLDPDVAAYIARDPAYEDTVSRIEALL
ATLLPRYAEGGKTYITVAFGCTGGRHRSVHVAERVARYLQDAGFSPTVSHRNMESAPQDA
LEKRRPGGPKAQS
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgacatccactcctgcgcccaagacgatcctgctggtgtcgggcctctccggcgctggc
aagacgaccgcgctcaagacgctggaggatatgggctgggaagtggtggacaacctgccg
ctggtcctgctcgaccggctgctcgacacgcctttgcccgccgggcacagcgatgcggac
gaacgcccgctcgccattggcatcgacgcgcgcacgcggggtttcgacgccaacgccatc
gtccgccggatcaaggctttgcgcgaaaagcatggccatgatgtcgaaacgctgttcctc
gattgttcgggcagcgagttggagcggcgttttgccgagacgcggcggcggcatccgctg
gcgctcgaccgccccgccgccgacggcatatcgcgggaacgggaattgaccgagccactg
cgccgctgggccagccaggtcatcgacacgacagcgttcagcagcaatgcgctgcaacag
gaaatccgcaatcgctacacgcgcgaacggttgtccgacccggtgctgacgatcctgtcc
ttcggcttttcgcgcggcatgccccgcaatgccgacctgatgttcgacatgcgctatctg
cgtaacccgcattgggacgacgcgctgcggcccaagaccggccttgatcccgatgtcgcc
gcctatatcgcgcgggacccggcctatgaggatacggtgagccggatcgaggcgctgctc
gccaccctgctgccgcgctatgcggagggtgggaaaacatacatcaccgtggcgttcggc
tgcaccggcgggcggcacagatcagtgcatgtggccgagcgtgtcgccagatacttgcaa
gatgcgggcttttcgcccacggtcagccacagaaacatggaatcagcgccccaggacgcc
ctggagaagcgcagaccgggaggcccgaaagcacaatcatga
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