KEGG   Sphingobium baderi: ATN00_06185
Entry
ATN00_06185       CDS       T04194                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K03684  ribonuclease D [EC:3.1.13.5]
Organism
sbd  Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:sbd03016]
    ATN00_06185
Enzymes [BR:sbd01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.13  Exoribonucleases producing 5'-phosphomonoesters
    3.1.13.5  ribonuclease D
     ATN00_06185
Transfer RNA biogenesis [BR:sbd03016]
 Prokaryotic type
  3'processing and CCA adding factors
   3'processing factors
    ATN00_06185
SSDB
Motif
Pfam: DNA_pol_A_exo1 RNase_H_2
Other DBs
NCBI-ProteinID: ALR19957
UniProt: A0A0S3EWZ0
LinkDB
Position
complement(1254077..1254694)
AA seq 205 aa
MTVYFHEEDLPEGVLAPGPIAVDTETMGLITPRDRLCVVQISDGKGDEHLVRFSPGSDYA
APNLKAVLADPERLKLYHFGRFDIAAIKHYLGVIAAPAYCTKIASRLVRTYTDRHGLKEL
VRELLGQEISKQQQSSDWGAPLLSDAQKDYAASDVRYLHLLKEQLDKRLIREGRMELAQA
CFDFLPHRAVLDLAGWPEIDIFAHM
NT seq 618 nt   +upstreamnt  +downstreamnt
atgaccgtctatttccatgaagaggatctgcccgagggcgtccttgcacccggcccgatc
gccgtcgatactgaaaccatgggcctcatcaccccgcgcgaccgactgtgcgtcgtccag
atcagcgacggcaagggcgatgagcacctggtgcgcttcagtccgggaagtgattatgcc
gcgccaaacctgaaggcggttctggctgatccggagcggctgaaactctatcatttcggg
cgtttcgatattgccgccatcaaacattatctgggtgtgatcgccgcgcccgcctattgc
accaagatcgcctcgcgtctggtacggacctataccgaccgtcatggcctgaaggaactg
gtgcgcgaactgctggggcaggaaatcagcaagcagcagcaaagttccgactggggcgcg
ccgctgctgtccgacgcgcaaaaggattatgcggcgtcggacgtgcgttatctgcatctg
ctgaaagaacagctcgacaagcggctgatccgcgaagggcgcatggaactggcgcaggct
tgtttcgatttcctccctcatcgggctgtcctagatctggcggggtggccggagatcgat
atcttcgcccacatgtaa

DBGET integrated database retrieval system