Sphingobium baderi: ATN00_06440
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Entry
ATN00_06440 CDS
T04194
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbd03032
]
ATN00_06440
03036 Chromosome and associated proteins [BR:
sbd03036
]
ATN00_06440
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_06440
DNA replication proteins [BR:
sbd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATN00_06440
Chromosome and associated proteins [BR:
sbd03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ATN00_06440
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ATN00_06440
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
Phage_cement_2
Peptidase_C23
Motif
Other DBs
NCBI-ProteinID:
ALR22431
UniProt:
A0A0S3F449
LinkDB
All DBs
Position
1300082..1300357
Genome browser
AA seq
91 aa
AA seq
DB search
MNNSDLADSIAAANGLSKADARKVVDGVFAAIADAAAKGEEVSLNGFGKFKVKDTPAREG
RNPATGATIQIAASKKLAFAPAKAVKDKLNG
NT seq
276 nt
NT seq
+upstream
nt +downstream
nt
atgaataacagcgatctggccgacagcattgcagccgcaaatggcttgtcgaaagcggat
gcgcgcaaggttgtcgacggcgtgttcgccgcgatcgccgacgcggcggccaagggagag
gaagtatcgctcaatggcttcggcaagttcaaagtgaaggatacgcctgctcgtgaagga
cgcaatcctgcgaccggcgccaccattcagatcgccgcttccaagaagctcgccttcgca
ccggccaaggccgtgaaggacaagctgaacggctga
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