KEGG   Sphingobium baderi: ATN00_06635
Entry
ATN00_06635       CDS       T04194                                 
Name
(GenBank) RNA polymerase subunit sigma-70
  KO
K02405  RNA polymerase sigma factor FliA
Organism
sbd  Sphingobium baderi
Pathway
sbd02020  Two-component system
sbd02040  Flagellar assembly
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    ATN00_06635
 09140 Cellular Processes
  09142 Cell motility
   02040 Flagellar assembly
    ATN00_06635
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbd03021]
    ATN00_06635
  09183 Protein families: signaling and cellular processes
   02035 Bacterial motility proteins [BR:sbd02035]
    ATN00_06635
Transcription machinery [BR:sbd03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     ATN00_06635
Bacterial motility proteins [BR:sbd02035]
 Flagellar system
  Flagellar assembly proteins
   Stator
    ATN00_06635
SSDB
Motif
Pfam: Sigma70_r4 Sigma70_r2 Sigma70_r3 Sigma70_r4_2 Packaging_FI HNH_repeat
Other DBs
NCBI-ProteinID: ALR20029
UniProt: A0A0S3EX79
LinkDB
Position
1333607..1334344
AA seq 245 aa
MYMSKVAAGSDVHTYGRRGTVNSPEQLARQYMPLVRKIAWHVHGRVSSAIEIEDLLQIGM
VALVEAANGFEDRGLGFASYAQMRVRGAMIDHLRRQATLCRSAMARRKELAGVRRKLEQR
LGRMPTEAEMSDEMGLDAAAYREMADGAEMVQHMSMDEVYSDQSMWFADVEDRADDVMER
ESLKAAMAQHIGELPQREALVLQLYFVEELNLEEIGQVLDIGAARVCQIKKAALDKLREK
LRDWD
NT seq 738 nt   +upstreamnt  +downstreamnt
atgtatatgagcaaagtcgccgccggatcggacgtccatacctacggacggcggggaacc
gtcaattcacccgagcaactggcgcggcaatatatgccgctggtccgcaagatcgcctgg
catgtccatggccgcgtatcgagcgccatcgagatcgaggacttgctccagatcggcatg
gtcgcgctggtcgaggcggccaatggcttcgaggatcgcgggttgggtttcgcctcctat
gcccagatgcgcgtgcgcggggcgatgatcgaccatttgcggcggcaggcgacgctttgc
cggtccgccatggcgcggcgcaaggaactggcgggcgtccggcgcaagctggagcagcgg
ctgggccggatgccgaccgaagcggaaatgtccgacgagatggggctggacgcggcggcc
tatcgcgagatggctgacggggccgagatggtccagcatatgagcatggacgaggtctat
tccgatcagtccatgtggttcgccgatgtcgaggaccgcgccgacgatgtgatggagcgg
gagtcgctgaaggcggccatggcgcaacatatcggagaactgccgcagcgcgaggcgctg
gtgctgcaactttatttcgtcgaggaactcaatctggaggaaatcgggcaggtgctggac
atcggcgcggcccgcgtgtgccagatcaagaaagcggcgctggacaagctccgcgagaag
ttgagggattgggattag

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