Sphingobium baderi: ATN00_08320
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Entry
ATN00_08320 CDS
T04194
Name
(GenBank) pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbd03016
]
ATN00_08320
Enzymes [BR:
sbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
ATN00_08320
Transfer RNA biogenesis [BR:
sbd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATN00_08320
Prokaryotic type
ATN00_08320
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ALR20307
UniProt:
A0A0S3EY05
LinkDB
All DBs
Position
complement(1674177..1674920)
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AA seq
247 aa
AA seq
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MTRFAFTVEFDGRPFMGWQRQAHGPSVQQAMEDAIFAVTGERAVIHAAGRTDAGVHGLAM
RCHADVEKDMPPFRLMEAVNARLRPHPVAVLACEAVPDDWHARFSCVGRSYVYRIVNRRA
PLTWESGLAWRVIQPLDEKAMQEAAQVLVGLHDFTTFRSAHCQSTSPIKTLDRLDVERAG
DRIAIHAAARSFLHHQVRSMVGCLAMVGMGRWSATDMQRALEARDRAALALNAPPDGLYF
VRADYPA
NT seq
744 nt
NT seq
+upstream
nt +downstream
nt
atgacccgcttcgctttcaccgtggaatttgacgggcggcccttcatgggctggcagcgg
caggcgcatgggccaagcgtgcagcaggccatggaggacgcgatcttcgctgtcacgggc
gagcgcgccgtgatccatgcggcggggcggaccgacgcgggggtgcatgggctggcgatg
cggtgccatgccgatgtcgaaaaggacatgccgcccttccggctgatggaggcggtcaat
gcgcggctgcggccccatcccgtcgcggtgctggcgtgcgaggcggtaccggatgactgg
catgcgcgcttttcctgcgtggggcggtcctatgtctatcgcatcgtcaaccggcgcgcg
ccgctgacatgggaaagcgggctggcgtggcgggtgatccagccgctcgatgaaaaggcg
atgcaggaagcggcgcaagtgctcgtcgggttgcatgacttcacgacgttccgttcggcc
cattgccagtcgacaagccccataaagacgctcgaccggctggacgtggagcgggcgggc
gaccggatcgcgatccatgcggcggcgcggtcgttcctccatcatcaggtgcgctcgatg
gtgggctgcctcgccatggtgggcatgggacggtggagcgcgacggacatgcaaagggcg
ctggaggcgcgggaccgggcggcgctggcgctcaacgcgccgccggacgggctgtatttc
gtgcgggcggactatccggcttga
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