Sphingobium baderi: ATN00_09055
Help
Entry
ATN00_09055 CDS
T04194
Name
(GenBank) hypothetical protein
Organism
sbd
Sphingobium baderi
Pathway
sbd02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ATN00_09055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Big_9
Cadherin_4
Cadherin_5
Motif
Other DBs
NCBI-ProteinID:
ALR20436
UniProt:
A0A0S3EYA2
LinkDB
All DBs
Position
1811258..1820476
Genome browser
AA seq
3072 aa
AA seq
DB search
MDFERDWDVSAADDRQPALGNEVSAALRVQMAMSQPGRMQHITPGPDGVVVLPAGTDLNQ
IHVVGRDLVVALPDGTQILIEDGAVFVPRLVLGDVEVPTINLAALLVGEEPQPAAGPPQS
SGGNFAGPPGDIGDRHGLGDLLPPTELVFTQPEQREIIPVAPDDDDQPEVTIVTPNQPAG
VSDASANVSEAGLGPREGEPAGSASAGNSETTSGTIVISSQDQPATVTINGVVVTAVGQT
ITTDIGVLTITSMNNGTIGYSYTLTDNIIGPPPAEIFTVVVTDADGDQATATLTIFIADD
VPTAVNDVDSVTEDGPLVADGNVLTGVGGGDANGTDGVADVQGADGAVVSTTGTFQGSYG
VLTLNADGSYSYTLANGNPAVQALVPGQTLTENFNYTITDGDGDTSTATLTITINGADDG
VTITGLDRDPGVNGAEEVVLESDLADGSSPDAAALTQQGSFSIAAADGLATVTIGGVAVL
SNGGFVAGQVITTPQGTLTITGFTPTSEAGGAVTAGTFTYTYVLTDNSLDHSTPGADSLF
QSFDVVATDRNGSSDSATLDIRIVDDVPTAHDDVDGVAAGSYGPEGGNVITGAGTVSGAA
GADVKGADGAVVAGVAAGAGGTAQVAAGSVGTAIAGAYGTLTLNADGSYSYVRAAGTPGG
VSDSFTYTLRDGDGDLSAATLRIDIADSQVVIISIPRVGDGTVVDEAGLDDPVGSNAAAD
VETTNGTITYSSPDGPSTITINGTVVTAPGQTIVTDKGVLTITGLTDGGIDYSYTLTDST
TGDDVTDSFQVTITDVDGDSATDTLVITILDDVPTAANDVDSVREDGPLVADGNVMTGSG
GTDANGTDGVADVPGADGAAVTGIAFGGTAGAVGALIAGAYGTLQIEADGSYRYVLNNGN
GVVQGLDSNQTLTETFTYTLTDGDGDTSSATLTITIQGRNDGVTITGLDGQGAEETVFEN
DLAEGSSPDAAALAQTGSFTLSALDGVSTITVGGQSIFANGAFTGATISNAYGSLQITGF
TPVIGADGDVIGGEVSYTYTLNDNTLLHTGGNDGSLTESFAVIVTDTDGSTDNASLDIRV
VDDVPVANDDSATQPSENAPVLINVFANDVAGADGVNLASGVVLESAAAKGTVVYQGNGV
FLYTPAAGAEGQDSFTYTITDRDGDQSTATVTITLAGDSEPTVRVSDLTVSEAGLPDGTQ
AASDLETDSGTMTIATGGDALAKVAVQDKDGNWIDVTAATAGSPIVVAGAGGQLTVTSDG
AGHYSYSYTLTDNDPTHPDNDPGDGDGISGAADPKAGDSFAVRVTDSDGDVSPTDHINVT
VLDDAPTLTVDGQISVVEGATATGTWSQVIGADQPGASTVVVVGANSYAIGAPINTGLGT
LTVNANGTWSFVSSNNLDNDLNPSLSFTVKVTDVDGDVAQDTQTIAIADGAGPAAGGPLT
LALDDQNLADGTTPGNPDFASGTVSFTAGSDALTGFAFAAGTGALGGGLTWNRVSGTLIE
GWDGPVGTGTKIVSLALSAPASIGAGLNGTVTVTATLLDNYDSHPGINLDDLVALGNIGV
VASDQDGDSATATVNLTVSDDVPTLMVDGQTSVVEGAAATGTWSQVIGADQPGASTVVVV
GANSYAIGAPINTGLGTLTVNANGTWSFVSSNNLDNDLNPSLSFTVKVTDADGDVAQDTQ
TIAIADGAGPAAGGPLTLALDDQNLADGTTPGNPDFASGTVSFTAGSDALTGFAFAAGTG
ALGGGLTWNRVSGTLIEGWDGPVGTGTKIVSLALSAPASIGAGLNGTVTVTATLLDNYDS
HPGINLDDLVALGNIGVVASDQDGDSATATVNLTVSDDVPTLMVDGQTSVVEGAAATGTW
SQVIGADQPGASTVVVVGANSYAIGAPINTGLGTLTVNANGTWSFVSSNNLDNDLNPSLS
FTVKVTDADGDVAQDTQTIAIADGAGPAAGGPLTLALDDQNLADGTTPGNPDFASGTVSF
TAGSDALTGFAFAAGTGALGGGLTWNRVSGTLIEGWDGPVGTGTKIVSLALSAPASIGAG
LNGTVTVTATLLDNYDSHPGINLDDLVALGNIGVVASDQDGDSATATVNLTVSDDVPTLM
VDGQTSVVEGAAATGTWSQVIGADQPGASTVVVVGANSYAIGAPINTGLGTLTVNANGTW
SFVSSNNLDNDLNPSLSFTVKVTDADGDVAQDTQTIAIADGAGPAAGGPLTLALDDQNLA
DGTTPGNPDFASGTVSFTAGSDALTGFAFAAGTGALGGGLTWNRVSGTLIEGWDGPVGTG
TKIVSLALSAPASIGAGLNGTVTVTATLLDNYDSHPGINLDDLVALGNIGVVASDQDGDS
ATATVNLTVSDDVPVALATAGEARGPELITVDNVNGNFATGQFSMHFGADGASSSGFNIT
GPTIAGVHYTETDVFNPMTGQFLRTELLAEVGGGGTPGTADDLFKLTVNADGSYRFDLIN
AEQVTTETISFASLGAGGPGFRELADDSATTGVNEAGRVEFQSNGTNGVNASTPGFGVDN
QWTDPGEWFSMEFHNPGTVGNDPAWVNPDLLDSITFGVQQVQHGPVDFTWTAIRYNSNGS
IAATESGSFTANAAGQITVDPTIQFSEFRIENVDTNGAVRFSTAVSVGRLVLPTDQNLAF
QVNGTDGDGDPMAPITIGVFVDATPSPIPPIAFDLDGDGLEFLGLAAGVSHDYGSGEVAT
AWVASDDGLLAHATEGGYDVNFADDVAGATSDLEGLRLAYDSNGNGLLDAGDAAFNEFGV
WQDANSDGKVDAGEYVSLTDAGIQSIQLISDGQAYTTANGDVKVVGEATYTKTDGSTGAV
GDVVFATATRDTDSSKIAAASTVASGLNQALIAASLIAAADLKLAPEHVDPLVQHQDGAR
AGDADQLAAAQGGFEALTPIASATTSPSDALADDPRDGAQTQAAERTSHGAEEASVDHAG
LAGGDGAATASADNAGGSDQSAPLEHQALLAQPINLANFDGAAAMLPAHQAAIADNAATA
AQVVTEALGQGDAPNIEALLAALPAGPHAIPLFNAGAAELLDGGHLAALAHGAGGAFDAA
MAMHEAMAVAHG
NT seq
9219 nt
NT seq
+upstream
nt +downstream
nt
atggatttcgagcgcgattgggatgtctctgcagccgatgatcgtcagccagcactgggc
aatgaggtgtccgccgcattgcgtgtacagatggcgatgtcacaacccggcagaatgcag
cacatcacccccgggccggacggcgtggttgtcctgcccgccggaacggacctgaaccag
atccatgtggtcggccgtgatctggtggtggcgttgccggatggcacccaaatattgatc
gaggacggtgcggtgttcgtgccacggcttgttcttggcgacgtcgaagttcccaccatc
aaccttgccgcgctgctggtcggcgaagagccgcaacccgcggctggtcccccacaaagc
tccggcggcaatttcgccggtcctccaggggacatcggtgaccgtcatggactaggcgat
ctgttgccaccgaccgagcttgtcttcacgcagcccgaacagcgtgaaatcatccccgtc
gcgcccgacgacgacgatcagccggaagtaacgattgtcacaccaaatcaaccggcgggt
gtcagcgatgcgagcgcgaacgttagtgaagcggggctggggccgcgcgaaggtgaaccc
gccggttccgcctcggcaggcaatagcgagacaactagcggcaccatcgtcatttcgtcg
caggatcagccagcgacagtgaccatcaacggcgttgttgtgaccgccgtggggcagacg
atcacgacggatattggtgtcctgaccatcacgtccatgaacaatgggacgatcggttac
agctataccctgaccgacaacatcatcggcccgcctccggccgaaatcttcacggtcgtg
gttaccgacgcggatggcgatcaggccaccgccacgctcaccatcttcattgcggacgac
gttccgaccgccgtcaacgatgtcgacagcgtgaccgaggacggtcccctggtcgcggat
ggcaacgtgctgacgggggtcggtggcggggacgccaatggcacggacggcgtggccgat
gtgcagggtgccgatggtgcggtggtttcgaccaccggcactttccagggcagctatggt
gttctcactctcaacgccgatggcagttacagctatacgctggccaatggaaatccggcg
gttcaggcgctggtcccaggccagaccctgacggaaaatttcaactacaccatcaccgat
ggggacggcgacacgtcgaccgcgacgctgaccatcaccatcaacggcgcggatgacggc
gtcacgatcacagggctggatcgggatccgggcgtgaacggcgctgaagaggtcgttctg
gaaagcgatctggcggacggcagttcgcccgacgcggcggcgctgacgcagcagggatcc
ttttccatcgccgcggccgatgggctggcgaccgtcaccatcggtggcgtggcggtgctg
tccaatggtggcttcgtggccggacaggtcatcacgacgccacagggcacattgaccatc
acgggttttactccgacctccgaggcggggggcgcggtgacggccggtacgttcacctac
acctatgtgctgaccgacaatagtctggatcacagcacgccgggggcggacagtctcttc
cagagcttcgacgtggtggccaccgatcgcaacggatcgagcgatagtgcaacgctggat
atccggatcgtcgatgatgtgcccacggcccatgacgacgtagatggcgtcgcggcgggc
agctatgggccggaaggcggcaatgtcattaccggagcggggactgtatccggggctgcc
ggcgctgatgtgaaaggcgctgatggggcggtcgtggcgggcgtggccgcaggtgccggg
ggaacggcgcaggtcgcggcgggaagcgtgggcacggcgattgccggtgcttatggcacg
ctgacgctcaacgccgatggcagctacagctatgtccgcgcggcgggcacgccaggcggc
gtcagcgacagcttcacatacacgctgcgggatggggatggcgacctgagcgccgcgacg
cttcggatcgacatagccgacagccaggtcgtcatcatctccattccccgcgtgggggat
ggaacggtggtcgatgaagccgggctggacgatccggtcggttccaacgccgcagcggat
gtagaaaccacaaacggcacgatcacctattcttcacccgatggtccgtcgacgattacg
atcaatggcacggtcgtcaccgcccccggacagaccatcgtcaccgacaagggcgtgctg
acgatcaccggcctgacggatggtgggatcgactattcctatacgctgacggacagtacg
accggcgacgatgtcaccgacagctttcaggtgaccatcaccgacgtcgatggcgatagc
gccaccgacacgctggtcatcaccatcctcgacgatgtgccgacagcggcgaatgacgtc
gattccgtgcgggaagacggaccgctggtagccgacggcaatgtcatgacgggttcgggc
ggcacggacgctaatgggacagatggcgtcgcggatgtgccgggcgcggatggcgcggct
gtcacgggcattgcctttgggggcacggcaggcgctgtaggtgccctgatcgcgggcgct
tatggcacgcttcagatcgaagcggacggaagctaccgctatgtgctgaacaatgggaat
ggcgtcgttcagggactggattcgaatcagaccctgaccgaaacctttacctatacgctg
actgacggggatggagacacctcgtccgcgacgctgaccatcaccattcagggccgcaat
gacggcgtgaccattaccggccttgatggacagggcgcggaagaaaccgtcttcgagaat
gatctggccgagggcagttcgcccgacgcggcggcgctggcccagaccggcagcttcacc
ctgagcgcgttggacggcgtgtcgacgatcacggtcggcggccagtcgatcttcgcgaac
ggcgccttcaccggagcgacgatctccaacgcttatggcagtttgcagatcaccggcttc
acgcccgtgatcggcgcggacggcgatgtcattggcggcgaagtttcctacacctatacg
ctgaacgacaacaccctgctgcacaccggcggcaatgacgggagcctgaccgagagcttc
gcggtgatcgtcaccgacacggacggatcgacggacaatgccagcctcgacattcgcgtg
gtcgatgacgttccggtcgcgaatgacgacagcgcgacgcagcccagcgaaaatgcaccg
gtgttgatcaatgtcttcgccaatgacgtggcgggtgcggacggcgtcaaccttgccagc
ggcgtggttctggaaagcgccgccgccaagggcacggtggtctatcagggcaatggcgtc
ttcctctatacgcccgcagcaggcgcggaggggcaggacagctttacctatacgatcacg
gatagagacggggatcagtccacggccacggtgacgatcacgctggcgggggattcggaa
cccacggtgcgggtttccgatcttaccgtatcggaagcgggcctgccggacgggacgcag
gcagcaagcgatctggaaaccgacagcggcaccatgaccatcgccactggcggggatgcg
ctggccaaggttgcggtgcaggacaaggatggaaactggatcgacgtgaccgcggccacc
gccggatcgccgatcgtggtggcgggcgctggcggacaattgaccgttacgtccgatggc
gccgggcattacagctacagctatacgcttaccgataatgacccgacccatcccgacaat
gatccgggcgatggcgacggcatcagcggcgcggcggatcccaaggcgggcgacagcttt
gcggttcgcgtgacggacagcgatggggacgtgtcgcccacggatcatatcaatgtgacg
gtgctggacgatgcgccgacgttgacggtcgatggccagataagtgttgtggaaggggcg
acggcgacgggcacctggtcgcaggtgatcggcgcggaccagccgggggcgagcacggtc
gtggtggtgggcgcgaacagctatgccatcggcgcgccgatcaatacggggctgggcacg
ctgacggtcaacgccaatgggacatggagctttgtgtccagcaacaatctggacaatgat
ctcaatccgtcgctgagcttcacggtgaaggtgacggatgtggacggcgacgtggcgcag
gacacgcagaccatcgccattgccgatggcgcggggccggcggcgggcggtccgctcacc
ctggcgctggacgaccagaatctggcggacgggacgacgcccggcaaccctgattttgcg
tcaggcacggtgagcttcacggccggatcggatgcgctgacgggctttgcctttgcggcg
gggaccggcgcgctgggcggcggtctgacgtggaaccgtgtgtcgggcacgctgatcgag
ggctgggacggtcctgtgggcaccggcacgaagatcgtgtcgctggcgctgtcggcgcct
gcctctatcggagcggggctgaacggcaccgtgacggtgacagcgacgctgctcgacaat
tatgacagccaccccggcattaatctggatgatctggtggcgctgggcaatatcggcgtg
gtggcatccgatcaggatggcgacagcgccaccgccacggtcaacctgaccgtgtccgac
gatgttccgacgttgatggtcgatggccagacgagtgttgtggaaggggcggcggcgacg
ggcacctggtcgcaggtgatcggcgcggaccagccgggcgcgagtacggtcgtggtggtg
ggcgcgaacagctatgccatcggtgcgccgatcaatacggggctgggcacgctgacggtc
aacgccaatgggacatggagctttgtctccagcaacaatctggacaatgatctcaatccg
tcgctgagcttcacggtgaaggtgacggatgcggacggcgacgtggcgcaggacacgcag
accattgccattgccgatggcgcggggccggcggcgggcggtccgctcaccctggcgctg
gacgatcagaatctggcggacgggacgacgcccggcaaccctgattttgcgtcaggcacg
gtgagcttcacggccggatcggatgcgctgacgggctttgcctttgcggcggggaccggc
gcgctgggcggcggtctgacgtggaaccgtgtgtcgggcacgctgatcgagggctgggac
ggtcctgtgggcaccggcacgaagatcgtgtcgctggcgctgtcggcgcctgcctctatc
ggagcggggctgaacggcaccgtgacggtgacagcgacgctgctcgacaattatgacagc
caccccggcatcaatctggatgatctggtggcgctgggcaatatcggtgtggtggcatcc
gatcaggatggcgacagcgccaccgccacggtcaacctgaccgtgtccgacgatgttccg
acgttgatggtcgatggccagacgagtgttgtggaaggggcggcggcgacgggcacctgg
tcgcaggtgatcggcgcggaccagccgggcgcgagtacggtcgtggtggtgggcgcgaac
agctatgccatcggtgcgccgatcaatacggggctgggcacgctgacggtcaacgccaat
gggacatggagctttgtctccagcaacaatctggacaatgacctcaatccgtcgctgagc
ttcacggtgaaggtgacggatgcggacggcgacgtggcgcaggacacgcagaccatcgcc
attgccgatggcgcggggccggcggcgggcggtccgctcaccctggcgctggacgatcag
aatctggcggacgggacgacgcccggcaaccctgattttgcgtcaggcacggtgagcttc
acggccggatcggatgcgctgacgggctttgcctttgcggcggggaccggcgcgctgggc
ggcggtctgacgtggaaccgtgtgtcgggcacgctgatcgagggctgggacggtcctgtg
ggcaccggcacgaagatcgtgtcgctggcgctgtcggcgcctgcctctatcggagcgggg
ctgaacggcaccgtgacggtgacagcgacgctgctcgacaattatgacagccaccccggc
attaatctggatgatctggtggcgctgggcaatatcggcgtggtggcatccgatcaggat
ggcgacagcgccaccgccacggtcaacctgaccgtgtccgacgatgttccgacgttgatg
gtcgatggccagacgagtgttgtggaaggggcggcggcgacgggcacctggtcgcaggtg
atcggcgcggaccagccgggcgcgagtacggtcgtggtggtgggcgcgaacagctatgcc
atcggtgcgccgatcaatacggggctgggcacgctgacggtcaacgccaatgggacatgg
agctttgtctccagcaacaatctggacaatgacctcaatccgtcgctgagcttcacggtg
aaggtgacggatgcggacggcgacgtggcgcaggacacgcagaccatcgccattgccgat
ggcgcggggccggcggcgggcggtccgctcaccctggcgctggacgatcagaatctggcg
gacgggacgacgcccggcaaccctgattttgcgtcaggcacggtgagcttcacggccgga
tcggatgcgctgacgggctttgcctttgcggcggggaccggcgcgctgggcggcggtctg
acgtggaaccgtgtgtcgggcacgctgatcgagggctgggacggtcctgtgggcaccggc
acgaagatcgtgtcgctggcgctgtcggcgcctgcctctatcggagcggggctgaacggc
accgtgacggtgacagcgacgctgctcgacaattatgacagccaccccggcatcaatctg
gatgatctggtggcgctgggcaatatcggtgtggtggcatccgatcaggatggcgacagc
gccaccgccacggtcaacctgaccgtgtccgacgatgttccggtggctctggcaactgcg
ggcgaagcgcgcggccctgaactcatcactgtcgataatgtgaatggcaactttgcaacg
ggccagttctcgatgcacttcggggccgatggcgcgtcatcgtccggcttcaatattacc
ggtccgacaatcgccggcgttcactacacagaaacggatgtattcaatcccatgacgggt
cagtttctgaggactgaactgcttgcggaagtcggtggaggaggtacgccgggaacggcc
gatgatctgttcaagctcacggtcaatgcagacggttcctatcggttcgacctgatcaat
gccgaacaggtgacgacggaaacgatttccttcgcgtctcttggtgcgggcgggccgggt
ttccgggaattggcggatgattctgcaacgaccggcgtcaatgaagcggggcgggttgag
ttccagtcgaatggaaccaacggtgtcaatgcaagcacgccgggctttggcgttgacaac
cagtggactgatcccggcgaatggttttccatggagttccacaacccaggaaccgttggc
aatgatcccgcatgggtcaatcctgatctgctcgactccataacattcggtgttcagcag
gttcagcatggaccagttgatttcacatggacggcgatacgctataattcgaacggcagt
atagcggccacggaaagcggtagctttacggcgaatgccgcagggcagatcacagtcgat
ccgacgattcagttcagcgagttccggatcgaaaatgtagatacgaatggcgctgtgcgg
ttttcgaccgcggtcagtgtgggaaggcttgtcctgcccacggatcagaatcttgccttc
caggtgaatggaacggatggcgacggcgatcccatggcaccgatcactatcggggttttc
gtcgatgcgacgccatccccaattcctccgatagccttcgaccttgacggtgatggactg
gaattcctgggtctggctgctggtgtgagtcatgattacggcagcggggaagtggccacg
gcctgggtggcttccgacgacgggctgctggctcatgccacggaaggcggctacgatgtg
aacttcgcggacgatgttgctggcgcgaccagtgaccttgaaggcctgcgccttgcctat
gacagcaatggcaacggcttgcttgacgcgggcgacgcggccttcaacgaattcggcgtg
tggcaggacgccaacagcgatggaaaggtcgatgcgggcgaatatgtctcgctgaccgat
gcgggcatccagtcgatccagctcatatcggacgggcaggcctatacgaccgccaatggc
gatgtgaaagtggtgggtgaagcgacctacacaaagacggacggaagcaccggcgctgtt
ggcgatgtcgtctttgccaccgcgaccagggacaccgacagcagcaagatcgcggcggca
tcgacggtggcgtcgggactcaatcaggcgctgatcgcggcgagcctcatcgcggcggcc
gaccttaagctggctcccgaacatgttgatcctctcgtgcagcatcaggacggggcacgg
gcaggtgacgccgatcagttggcggccgctcagggcggattcgaagcgctcacgccaatc
gcttcagccaccacctcgccttcggatgcattggctgacgatccgcgtgacggcgctcag
acacaagcggccgaacggacgagtcatggcgcggaggaggcatccgtcgatcatgccggt
cttgccggaggtgacggggcggccaccgcatcggctgacaatgcaggcggatcggatcag
tccgcgccgctcgaacatcaggcgctgctggcgcaaccgatcaacctggcgaatttcgat
ggtgcggcggcgatgctgcccgcccatcaagccgcgatcgcggacaatgccgcgacagcc
gcgcaggtcgtaacggaggcactgggccaaggcgatgcgccgaatatcgaagcgctgctc
gccgcgcttccggccgggccgcatgccattccgctcttcaacgcgggtgcggctgaattg
ctcgacggcgggcatctggcggcgctcgcgcatggcgcgggcggggcattcgacgccgcg
atggccatgcacgaggcgatggctgtcgcgcacggctga
DBGET
integrated database retrieval system