Sphingobium baderi: ATN00_09560
Help
Entry
ATN00_09560 CDS
T04194
Name
(GenBank) farnesyltranstransferase
KO
K02523
octaprenyl-diphosphate synthase [EC:
2.5.1.90
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00900
Terpenoid backbone biosynthesis
sbd01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
ATN00_09560
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
sbd01006
]
ATN00_09560
Enzymes [BR:
sbd01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.90 all-trans-octaprenyl-diphosphate synthase
ATN00_09560
Prenyltransferases [BR:
sbd01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
ATN00_09560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
DUF5685
Motif
Other DBs
NCBI-ProteinID:
ALR20516
UniProt:
A0A0S3EYI4
LinkDB
All DBs
Position
complement(1923161..1924213)
Genome browser
AA seq
350 aa
AA seq
DB search
MAPVMTAPATGPVTGNVHPIGRTGSAPSLAPMMALVADGMNQVNAVILDRMQSRIPLIPE
LAGHLIAGGGKRMRPMLTLACAELVGYAGSRHYKLAAAVEFIHTATLLHDDVVDGSGLRR
GRKTANIIWGNSASVLVGDFLFSRSFELMVEAESLKVLKILSGASAVIAEGEVNQLTAQR
KIDTSEEQYLDIIVAKTAALFAAACRISAVVAGRDEAEEQALDVYGRNLGIAFQLIDDAI
DYESDGATMGKDAGDDFRDGKVTLPVILAYARGSEEDRAFWKAAIAGHRIADEDLAHATR
LLRETGAIDDTLARARHYGQRAIDALGMFDGGKAKAALVEAVEFAIARAY
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggcccctgtcatgaccgcacccgccacaggccctgtcacaggcaatgtccaccctatc
ggccgcaccggcagcgcgccttcgctcgcgcccatgatggctctggtggcggatgggatg
aatcaggtgaacgccgtcatcctggatcggatgcagtcgcgtatcccgctgatccccgaa
ctggcgggccatctgatcgcgggcgggggcaagcggatgcggccgatgctgacgctcgcc
tgcgccgaactggtgggttacgccggatcgcgccattacaaactcgccgccgcggtcgag
ttcatccacaccgccacgctgctgcatgacgatgtggtcgacgggtcggggctgcgccgt
ggccgcaagaccgccaacatcatctggggcaacagcgccagcgtgctggtgggcgatttc
ctcttctcccgctccttcgaactgatggtcgaggccgaatcgctcaaggtgctgaagatc
ctgtcgggcgcttccgcggtgatcgcggaaggcgaggtcaaccagctcaccgcccaacgc
aagatcgacacgagcgaagagcagtatctcgatatcatcgtcgccaagaccgccgccttg
ttcgccgctgcctgccgcatctccgccgtggtcgccggacgtgacgaggcggaggaacag
gcgctggacgtctatggccgcaacctcggcatcgcatttcaactgatcgacgacgccatc
gactacgaatcggatggcgcgaccatgggcaaggatgcaggagatgacttccgcgacggc
aaggtgacactcccggtgatcctcgcttatgcgcggggttcggaagaagatcgcgccttc
tggaaagccgccatcgccgggcaccggatcgccgatgaagatctggcccatgcgacgcgg
ctgctgcgcgagacgggcgcgatcgacgatacgctggcccgcgctcgccattatgggcag
cgtgccatcgacgcactgggcatgttcgacggcggcaaggccaaggcggcgctggtggaa
gcagtggaattcgccatcgcgcgtgcatactga
DBGET
integrated database retrieval system