KEGG   Sphingobium baderi: ATN00_10365
Entry
ATN00_10365       CDS       T04194                                 
Name
(GenBank) conjugal transfer protein TrbB
  KO
K20527  type IV secretion system protein TrbB [EC:7.4.2.8]
Organism
sbd  Sphingobium baderi
Pathway
sbd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    ATN00_10365
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sbd02044]
    ATN00_10365
Enzymes [BR:sbd01000]
 7. Translocases
  7.4  Catalysing the translocation of amino acids and peptides
   7.4.2  Linked to the hydrolysis of a nucleoside triphosphate
    7.4.2.8  protein-secreting ATPase
     ATN00_10365
Secretion system [BR:sbd02044]
 Type IV secretion system
  Trb secretion system protein
   ATN00_10365
SSDB
Motif
Pfam: T2SSE Zeta_toxin FtsK_SpoIIIE AAA_16 TrwB_AAD_bind AAA_19 ABC_tran DEAD AAA_29 nSTAND3 cobW DUF815 AAA_30 DUF87 CbiA AAA_22 ResIII RsgA_GTPase MMR_HSR1 AAA_7 ATPase Septin Sigma54_activat NACHT TsaE AAA_25 MobB AAA_28 ABC_ATPase SLFN-g3_helicase Mur_ligase_C Sigma54_activ_2 AAA_11 GTP_EFTU P-loop_TraG AAA_23 ATP_bind_1 DLIC SRP54 Pox_A32 UvrD-helicase Viral_helicase1 AAA PduV-EutP IIGP AAA_10
Other DBs
NCBI-ProteinID: ALR20646
UniProt: A0A0S3EZ53
LinkDB
Position
2091948..2092934
AA seq 328 aa
MTVHPIRSEAKTRGARMLRTALGPSIAAWLDDSQVIEVMLNPDGRLWVDRLGEGISDTGM
TLAAADGERIVRLVAHHVGVEVHARSPRVSAELPEGGERFEGLLPPVVAAPAFAIRKPAV
AVFTLDDYVTAGIMSSAQADTLRQAVPARANILVAGGTGSGKTTLVNALLAEVAKTADRI
VLIEDTRELQCAAPNLVAMRTKDGVASLSDLVRSSLRLRPDRIPIGEVRGAEALDLLKAW
GTGHPGGIGTIHAGTALGALRRMEQLIQEAVITVPRALLAETIDLIAVLVRDGHGRRLAE
LARVEGLDAATGDYRLTPLSTTQPGDEP
NT seq 987 nt   +upstreamnt  +downstreamnt
ttgaccgtccacccgatccgttccgaggcgaagacacgcggcgcgcgaatgctgcgcacg
gcgctgggaccgtcgatcgcggcctggctcgatgacagccaggtgatcgaggtgatgctg
aacccggacggccggttgtgggtcgaccggctcggcgaagggatcagcgacaccggcatg
acgctggccgccgcggacggggagcgcatcgtgcgcctggtcgcccaccatgtcggcgtc
gaggttcatgcccggtctccgcgcgtctcagccgaactgcccgagggcggcgagcggttc
gaggggctgctgccgcccgtggtggccgcgccggccttcgcgatccgcaagcccgccgtc
gcggtgttcacattggacgactatgtgaccgccgggatcatgtcgtccgcccaggcggac
acgctccggcaggctgttccggcccgcgccaacattctcgtggcgggtggaaccggcagc
gggaaaaccacgctggtcaacgcgctgctcgccgaggtggcgaagaccgccgaccgcatc
gtgctgatcgaagatacgcgcgaactgcaatgcgccgcgcccaacctcgtcgccatgcgg
accaaggatggcgtcgcctcactgtccgatcttgtccgctcgtcgctgcgcctgcggccc
gatcgcatcccgatcggcgaggtgcgcggcgccgaggcgctcgacctgctcaaagcctgg
gggaccggccaccccggcggcatcggcacgatccacgccgggaccgcgctcggggcgctg
cggcgcatggagcagcttatccaggaggccgtgatcacggtgccccgcgcgctgctcgcc
gagacgatcgacctgatcgccgtgctggtgcgcgacggacacggccggcgcctcgccgaa
ctggcccgtgtcgaagggctcgacgctgccaccggcgactaccgcctcacgccgctttcc
accacccaacccggagatgaaccatga

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