Sphingobium baderi: ATN00_10630
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Entry
ATN00_10630 CDS
T04194
Name
(GenBank) pseudouridine synthase
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbd03016
]
ATN00_10630
Enzymes [BR:
sbd01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
ATN00_10630
Transfer RNA biogenesis [BR:
sbd03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ATN00_10630
Prokaryotic type
ATN00_10630
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ALR20687
UniProt:
A0A0S3EZ26
LinkDB
All DBs
Position
2151284..2152177
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AA seq
297 aa
AA seq
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MHGWIILDKPLGLGSTQAVGAVKRALRQSGAGKVKVGHGGTLDPLATGVLPVAIGEATKL
AGRMLDSDKIYDFTIDFGAQTDTLDLEGEVIATSSIRPTPAQVEAILSRFTGPIEQAPPA
YSAILIDGQRAYDLARAGQDVQMKMRGVVIHSLTITASEAEGEGLASITLTAHVSKGTYI
RSLARDIALALGTVGHVTMLRRVKAGPFTLDSAISLDKLNEAATGGGIVQLMLPLTAGLD
DIPALPVSPDEALALRQGKALMGKPHTGLMLAMEGDTPVALVEASGPDIRVVRGFNL
NT seq
894 nt
NT seq
+upstream
nt +downstream
nt
atgcatggctggatcatcctcgacaaacccttgggactaggctcgacgcaggcggtgggg
gcggtcaagcgtgccttgcgccaaagcggcgcggggaaagtgaaggtaggccatggcggc
acgctcgatccccttgcgacgggcgtgctgccggtcgccataggggaagcgaccaaactt
gcggggcggatgctcgatagcgacaagatttacgatttcaccatcgactttggcgcgcag
accgacacgctcgatctggaaggggaggtgatcgcgaccagcagcatccgccccacgcca
gcgcaggtggaagcgatcctgtctcgctttaccggccccatcgaacaggcgccgcccgcc
tattccgcgatcctgatcgacggccagcgcgcctatgacctcgcccgcgccgggcaggat
gtgcagatgaagatgcggggcgtggtgatccattccctcaccatcacggccagtgaagcg
gaaggggaggggctggcttccatcacccttaccgcccatgtttccaagggcacctatatc
cgcagcctcgctcgcgatattgcgctggcgctgggcacggtcggccatgtcaccatgctg
cgccgggtgaaagcggggccgttcacgctcgactccgctatttcgctggacaaattgaac
gaagctgctacgggcggcggcatcgtgcagcttatgctgccgttgacggcggggctggac
gacatcccggctctccccgtctctcccgatgaagcgctggctctccgacaggggaaggcg
ctgatggggaaaccgcataccggtctcatgctggcgatggagggcgatacgcccgtcgcg
ctggtggaggccagtggcccggatatccgggtggtgcgcggctttaatctctag
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