Sphingobium baderi: ATN00_10965
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Entry
ATN00_10965 CDS
T04194
Name
(GenBank) penicillin-binding protein
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00550
Peptidoglycan biosynthesis
sbd01100
Metabolic pathways
sbd01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
ATN00_10965
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
ATN00_10965
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
sbd01003
]
ATN00_10965
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
ATN00_10965
Enzymes [BR:
sbd01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
ATN00_10965
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
ATN00_10965
Glycosyltransferases [BR:
sbd01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
ATN00_10965
Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
ATN00_10965
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
Beta-lactamase2
Motif
Other DBs
NCBI-ProteinID:
ALR20738
UniProt:
A0A0S3EZ98
LinkDB
All DBs
Position
complement(2223787..2225844)
Genome browser
AA seq
685 aa
AA seq
DB search
MNDPLPTVDPAAGASRPFGAGPPSAFVPPTPWKRRLQIMGWIIAGLMALLMIIIAWLAVT
APLSRSLEPIAPPSISLMSSDGHLIARRGAVIDKPVAIKDLPAHVPQAFMAIEDRRFYSH
WGIDPRGIARAAWHNLWSDSSSQGGSTITQQLAKGVFLSSNRTFGRKGREALIAFWLEAW
LTKDQIFERYLSNVYFGDNVYGLRAASLHYFNRQPERLTISQAAMLAGLLKAPSRLAPTT
NLEGARTRADLVTQAMVDAGYITKAQRDALSPARLNVHETADPTSGTYFADWVLPDARDR
AGAVYGAQNVTTTLDWRIQRLAESAVRRAPLGGAEAALVAMKPDGSVVAMVGGRNYGKSS
FNRAVQAKRQPGSTFKLFVYLAAFRAGMTPDDMIEDRPITTGTYRPANHGGKYRGQITLR
QAFAVSSNVAAIRLTQKVGIDNVIKVARDLGVTAPLTEDLSLALGTSEIPLIELAEAYAA
VAAGAYPVMAHGLPPEEQGWFDRLMRRQHHFSDDQLEMIRDLLSSAANQGTGSAAALRTS
TFGKTGTTQDSRDAIFVGYAGGLVTAVWIGNDDNSPLPGGSAGGGIPARIWRDFMSRAIN
EPVENAPEEQKDSDLVNAIANVTVEAGLGNMSVDVNQEGMTVNIGPAQIRLPTEQSPPGQ
APAPQQGTPPPRVAPTQPPGQGAPQ
NT seq
2058 nt
NT seq
+upstream
nt +downstream
nt
atgaacgatcccttgccaaccgtcgaccctgccgccggcgcctcgcgccccttcggcgca
ggaccacccagcgccttcgtgccgcccacgccttggaaaaggcggctgcagatcatggga
tggatcatcgcggggctgatggccctgctgatgattatcatcgcctggctggcggtgacg
gcacccttgtcgcggtcgctggagccgattgcgccacccagcatcagcctgatgtcgtcg
gacgggcatctgatcgcccgacgcggagccgtgatcgacaagccggtcgcgatcaaggac
ttgcccgcccatgtgccacaggctttcatggcgatagaggatcggcgcttctacagtcat
tggggcatcgatccgcgcggaatagcgcgagcggcctggcacaatttgtggtcggacagc
tcatcgcagggcgggagcaccatcacccagcagcttgccaaaggcgtgttcctttccagc
aatcgcaccttcgggcgcaaggggcgcgaagcgttgatcgccttctggctggaggcctgg
ctgacgaaggaccagattttcgaacgctatctgtcgaacgtctatttcggcgacaatgtc
tatggattaagggccgcctcgctccattatttcaatcgccagcccgaacggctgaccata
tcgcaggcggccatgctggcgggtcttttgaaagcgccatcccgccttgcccccacgaca
aatcttgaaggcgcccgcacccgcgccgatctggtgacgcaagcgatggtggacgcgggc
tatatcaccaaagcgcagcgcgacgccctctcccccgcgcggctcaatgtgcatgaaacg
gccgatcctaccagcggcacctatttcgcggattgggtgctgcccgatgcgcgggaccgt
gcgggcgcggtatatggtgcccagaatgtgacgactacgctcgactggcgcatccagcgc
ctcgccgaaagcgccgttcgccgtgcgccgctgggcggggcggaggcggcgctggtggcc
atgaagccggacggcagcgtcgtcgccatggtcgggggccgaaattatggaaaaagcagc
ttcaaccgcgccgttcaggccaaacggcaacccggctcgaccttcaagctgttcgtctat
ctggcagcctttcgcgccgggatgacgccggacgacatgatcgaagacaggccgatcacc
acgggcacctatcgccccgccaaccatggcggcaaatatcgcgggcaaatcaccctgcgg
caggccttcgccgtctccagcaatgtggcagccatacggctgacgcaaaaggtgggcata
gacaacgtcatcaaggtcgcccgcgacctgggcgtcaccgcgccgctgaccgaggatctg
agccttgcgctcggcacgtcggaaattccgctgatcgagctggccgaagcctatgcggcg
gtggcggcgggcgcctatccagtcatggcccatggcttgccgccggaggaacagggctgg
ttcgaccgcctgatgcgacgccagcatcatttcagtgacgatcagttggaaatgatccgc
gaccttctctcttccgccgccaatcagggcacggggagcgcggcggcgctgcggaccagc
actttcggcaagaccgggacgacgcaggacagccgggatgcgatcttcgtgggctatgcc
ggaggtctggtgacagcggtgtggatcggcaatgacgataacagccccttgcccggcgga
tcggcgggcggcggcataccggcgcgtatctggcgggatttcatgagccgggcgatcaat
gagccggtcgagaatgcacccgaggaacagaaggacagcgacctcgtcaatgccatcgcc
aatgtgacggtggaagcgggccttgggaacatgagcgtggacgtcaatcaggaaggtatg
acggtgaacatcggtccagcccagattcgcctgcccaccgagcaatctccgcccggtcaa
gcgcccgcgccgcaacaaggcacgccgccgccccgcgtcgcgccgacccaaccgcccggc
cagggtgcgccgcaatag
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