Sphingobium baderi: ATN00_11705
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Entry
ATN00_11705 CDS
T04194
Name
(GenBank) 3-hydroxyacyl-CoA dehydrogenase
KO
K01782
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00071
Fatty acid degradation
sbd00280
Valine, leucine and isoleucine degradation
sbd00310
Lysine degradation
sbd00362
Benzoate degradation
sbd00380
Tryptophan metabolism
sbd00410
beta-Alanine metabolism
sbd00640
Propanoate metabolism
sbd00650
Butanoate metabolism
sbd00907
Pinene, camphor and geraniol degradation
sbd00930
Caprolactam degradation
sbd01100
Metabolic pathways
sbd01110
Biosynthesis of secondary metabolites
sbd01120
Microbial metabolism in diverse environments
sbd01200
Carbon metabolism
sbd01212
Fatty acid metabolism
Module
sbd_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ATN00_11705
00650 Butanoate metabolism
ATN00_11705
09103 Lipid metabolism
00071 Fatty acid degradation
ATN00_11705
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
ATN00_11705
00310 Lysine degradation
ATN00_11705
00380 Tryptophan metabolism
ATN00_11705
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ATN00_11705
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
ATN00_11705
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
ATN00_11705
00930 Caprolactam degradation
ATN00_11705
Enzymes [BR:
sbd01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
ATN00_11705
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
ATN00_11705
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
ATN00_11705
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
F420_oxidored
NAD_Gly3P_dh_N
DAO
2-Hacid_dh_C
Pyr_redox_2
Sacchrp_dh_NADP
AlaDh_PNT_C
NAD_binding_8
LSDAT_euk
XdhC_C
Motif
Other DBs
NCBI-ProteinID:
ALR20863
UniProt:
A0A0S3EZM5
LinkDB
All DBs
Position
complement(2376470..2378647)
Genome browser
AA seq
725 aa
AA seq
DB search
MSTIAFDIDGDGIATLTIDVPGQSMNVIGPDFITDLDAAITRIASEEAIKGAVIASGKDS
GFMAGMDLKFLGAMLASAEGERPAPADIFDKVFVLNQLFRRLETCGKPVACAIEGTCVGG
GLELAMACHRRVVGDSPKTQLGLPEILIGLFPGGGGSQRMTRLMGVQAALMYMLQGKLFR
PAEAAMLKVVDEVVPQGTALDTAKAWVKANPTASVQPWDVKGFKIPGGAGGFNPAFVQTM
AGAVPMTLKQTQRNMNAPIALLSAVYEGAILPIDQAIRIESKYFAKVAADPQASNMIRSL
FVNKQAAERGARRPKDQPKAPTRKLAMLGAGMMGAGIATVAAQAGMEVVLFDRDLAYAEK
GKAHVEEQLSKRLGKGMTPEKMAETLARVTPTTDYAALAGADFVIEAVFEDVAIKAEVTK
KVEEVLGADTIFGSNTSTLPITKLAKAWSKPANFIGIHFFSPVEKMPLVEIILGRETGPA
AIAKALDFVAQIKKTPIVVNDSRGFYTSRCFGTYVQEGVEMVAEGVNPALIENGGRQLGM
PVGPLAVGDEVSIELGNKIVLAAKKELGDAYVPQRSDELMAQMVELGRLGRKSAKGWYDY
PEGGKKHLWPGLADLFPLAADQPDVEAVKERLLYRQLIECARCFEEGVLETPEDGDIGAI
FGWGFAPWTGGPFSHMDTVGIAHVVAVLDRLAAAHGERFAPTKQLREMAASGATFYRPAP
SRAAA
NT seq
2178 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaatcgcattcgacattgacggcgacggcatcgccacgctgaccatcgacgtg
cccggtcagtcgatgaacgtcatcggcccggatttcatcaccgatctggacgcggcgatc
acgcgcatcgcgtcggaagaagccatcaagggcgccgtcatcgcgtcgggcaaggacagc
ggcttcatggccggcatggacctgaaatttctgggcgcgatgctggcaagcgcggaaggc
gaacgccccgcccccgccgatatattcgacaaggtgttcgtgctgaaccagcttttccgc
cgtctggaaacctgcggcaagccggtcgcctgcgccattgagggcacctgcgtcggcggc
gggctggaactggcgatggcctgtcatcggcgcgtggtgggggatagccccaagacgcag
ttgggattgcccgaaatactgatcggcctgtttcccggcggtggcgggtcgcagcgcatg
acgcgcctgatgggggtgcaggcggcgctgatgtatatgttgcaaggcaagctgttccgg
cccgccgaagcggcgatgctgaaagttgtcgatgaagtggtgccgcagggcacggcgctg
gacacggcaaaggcgtgggtgaaggcgaatccgaccgcatcggtgcagccatgggatgtg
aagggcttcaaaattccgggcggcgcgggtgggttcaaccccgctttcgtgcagaccatg
gcgggcgccgtgccgatgaccctcaagcagacgcagcgcaacatgaacgcgcccatcgct
ttgctgtcagcagtctatgaaggcgcgatactgcccattgatcaggcgatccggatcgag
agcaaatatttcgccaaggtcgccgccgacccgcaggcgagcaacatgatccgcagcctg
ttcgttaacaagcaggccgccgaacgcggcgcgcgccgccccaaggaccagcccaaggcg
ccgacgaggaagctcgccatgctgggcgcgggcatgatgggcgcaggcatcgccacggtc
gccgctcaggcggggatggaggtcgtgctgttcgaccgggatctggcctatgcggaaaaa
ggcaaggcgcatgtcgaggagcagttaagcaagcggctcggcaagggcatgacgccggag
aagatggcggagacgctggcccgcgtgacgccgacgaccgactatgcggcgctggccggg
gcggatttcgtgatcgaggcggtgttcgaggatgtcgccatcaaggcggaagtcacgaaa
aaggtcgaggaagtgctgggcgcggacacgatcttcgggtccaacacgtcgacgctgccg
atcaccaagctggcgaaggcgtggagcaagccggcgaatttcatcggcatccactttttc
tcgccggtcgagaagatgccgctggtagaaatcatcctggggcgcgaaaccggccccgcc
gccatcgccaaagcgctggatttcgtggcgcagatcaagaaaacgcccatcgtcgtcaat
gactcgcgcggcttctatacctcgcgctgcttcggcacctatgtgcaggagggtgtggag
atggtggccgaaggggtcaatccggcgctgatcgaaaatggcgggcggcaattggggatg
cccgtggggccgctggccgtgggcgatgaggtgtccatcgagctgggcaacaagatcgtg
ctcgcggcgaagaaggaactgggcgatgcctatgtcccgcagcggtccgacgaattgatg
gcgcagatggtggaattgggccgtttgggccgcaagagcgcgaagggatggtatgactat
cccgaaggcgggaagaagcatctgtggccgggtctggccgatctgttcccgctggccgcc
gatcagcccgatgtggaggccgtgaaggagcggctgctctatcggcaactgatcgaatgt
gcccgctgtttcgaggagggcgtgctggagacgccggaggatggcgatatcggcgcgatc
ttcggctggggctttgcgccctggaccggcgggccgttcagccatatggatacggtcggc
atcgcgcatgtggtggcggtgctggaccggctggcggcagcgcatggcgaacggttcgcg
ccgacgaagcaattgcgggagatggcggcgagcggcgcgaccttctatcgccccgctccg
tcccgcgccgcggcataa
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