Sphingobium baderi: ATN00_12900
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Entry
ATN00_12900 CDS
T04194
Name
(GenBank) RNA pyrophosphohydrolase
KO
K08311
putative (di)nucleoside polyphosphate hydrolase [EC:3.6.1.-]
Organism
sbd
Sphingobium baderi
Pathway
sbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ATN00_12900
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbd03019
]
ATN00_12900
Messenger RNA biogenesis [BR:
sbd03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
ATN00_12900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NUDIX
Motif
Other DBs
NCBI-ProteinID:
ALR21060
UniProt:
A0A0S3F083
LinkDB
All DBs
Position
complement(2611114..2611599)
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AA seq
161 aa
AA seq
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MASMPKDEELGYRPCVGIMLVNMEGQVFVGQRIDNRAEAWQMPQGGIDDGEDAKAAALRE
LGEETGIHRKHVEIIAKARDEHFYDLPPELVGQIWGGKYRGQRQIWFLARFLGEDGDIDI
ETPHPEFRAWKWTAPETLPDLIVPFKRKLYRDILQEFQSLI
NT seq
486 nt
NT seq
+upstream
nt +downstream
nt
gtggcttccatgccaaaggatgaagaactgggctatcgcccgtgcgtcgggatcatgctc
gtcaatatggaagggcaggtctttgtcggtcagagaatcgataaccgggcggaagcctgg
cagatgccgcagggcggcatcgacgatggcgaggacgcgaaggcggccgccctgcgtgaa
ctgggcgaggaaaccggcatccatcgcaagcatgtggaaatcatcgccaaggcgcgcgac
gagcatttctacgacctgccgcctgaactcgtcggtcagatctggggcggcaaatatcgc
ggccagcggcagatatggttccttgcccgctttctgggggaggacggagacatcgacatc
gaaacgccgcacccggaatttcgcgcatggaaatggacggcgcctgaaacgctgcccgat
ctcatcgttcccttcaagcgcaagctgtatcgcgacatcttgcaggaattccagtcgctc
atctga
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