Sphingobium baderi: ATN00_13000
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Entry
ATN00_13000 CDS
T04194
Name
(GenBank) lytic murein transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
ATN00_13000
Enzymes [BR:
sbd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
ATN00_13000
Peptidoglycan biosynthesis and degradation proteins [BR:
sbd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
ATN00_13000
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GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ALR21076
UniProt:
A0A0S3F0A5
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All DBs
Position
complement(2633437..2635218)
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AA seq
593 aa
AA seq
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MIRATTCLSRLALLMLGAATVLPVKAETAAMVAALPINSTPLRLSDGDKGRYRAIFASLQ
DQKWIDAKAMILTLDQQDPMRSMALAELYLAKGSPRTELFDLLDLLNKASWLPRADQLSR
LAQKRGATILPDLPQVQKLVWLGSAPRREYVRATKTDLLAQSLASRIQPFINNDDPAGAE
GLLTTGEAGLTPEGLTEVRQRVAWAYYIESDDGNARRMAAKALEVRSGGDWTVQAHWTTG
LAAWRQNDCIAAAPAFANVAALSGNADMRAAGAYWAARAYMICGQPEKVENLLKVAARSD
ETFYGLLARETLGLPLGGAAMGVRFGEAEWQQLKANPNVRAAIVFAAIGQSDKADEALRY
QAKLGGTTQYDALLRLASALNLPATQLWLAHNGPAGKQPESFARFPAPDWKPDGGWRVDP
SLVFAHTLQESGFRADAVSSAGARGLMQVRPGTGSDMGLSSPAQLFVPSTNMEYGQRYLE
TLRDMSATGGLLPKVMAAYNAGPLPVQRWNVQVKDNGDPLLFMESLPYYETRAYVNIVMR
NYWMYQIQAQGKAECLTGMAQGLWPTFPGTKGSRLVRLTRVDGKSLIAAGGSD
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
gtgattcgcgccaccacctgcctctcccgcctggcccttctgatgctgggcgccgcgacg
gttctgcccgtaaaagccgaaacggcggccatggttgccgcccttccgataaattccacc
ccgcttcgattgagcgacggcgacaagggacgataccgcgccattttcgcctcgcttcag
gaccagaaatggatcgacgcaaaagcaatgatcctgactctcgaccagcaggacccgatg
cgttccatggcgcttgccgaactctacctggcgaagggctcgccacgcaccgaactgttc
gaccttctcgacctgctgaacaaggcgtcatggctgccgcgcgcggatcagctttcccgc
ctggcccagaaacgtggcgcgaccattctaccggatctgcctcaagtccagaagctggtc
tggctgggctccgcaccgcgccgcgaatatgtgcgcgcgaccaagaccgatctgctggcg
caaagcctcgccagccgcatccagcccttcatcaataatgacgatccggccggagcggaa
ggactgctcaccaccggcgaagcgggcctgacgcccgaagggctgaccgaagtgcgccaa
cgcgttgcatgggcctattatatcgaaagcgacgacgggaacgcccggcgcatggccgca
aaggcgctggaagttcggtcgggcggcgactggacggtgcaggcgcattggacgacgggc
cttgccgcatggcgtcagaatgactgcatcgccgccgcacctgcttttgcgaatgtggcg
gccctgtcgggcaatgccgatatgcgcgcggcgggcgcctattgggccgcgcgggcctat
atgatatgcgggcagcccgaaaaagtcgaaaatttgctcaaggtcgcggctcgttcggac
gaaaccttctatggccttcttgcccgcgagacgctgggcttaccgctgggcggcgcggcg
atgggcgttcgcttcggcgaagcggaatggcagcagttgaaggccaatcccaatgtccgc
gcagcgatcgtctttgcggccatcggccagtccgacaaggccgatgaagccttgcgctat
caggccaaactgggtggcaccacgcaatatgatgcgctgctccgtctggctagcgccctc
aatcttcccgcgacgcagttgtggcttgcccataatggccccgccggaaagcagccggaa
agcttcgcgcgcttccccgcccccgactggaagcccgatggcggctggcgcgtcgatcct
tcgctggtctttgcccacacacttcaggaatccggctttcgcgcggatgccgtcagttcc
gcgggcgcgcgtggcttgatgcaggtccggccggggacgggcagcgacatggggttatcc
tcccccgcgcagttgttcgtgccgtccaccaacatggaatatggccaacgctatctggaa
accttgcgcgacatgagcgcgaccggcggccttctgcccaaggtcatggccgcctataat
gccgggcctctgcccgtgcagcgctggaatgtccaggtgaaggacaatggcgatccgcta
ctattcatggaatccctgccctattatgaaacgcgcgcctatgtgaacatcgtcatgcgt
aattactggatgtatcagatccaggcgcagggcaaggcggagtgcctgaccggcatggcg
cagggcctttggcccacattccccggcaccaagggaagccggctggttcgcctgacgcgc
gttgacgggaaaagcctgatcgcagcgggcggcagcgattga
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