Sphingobium baderi: ATN00_13310
Help
Entry
ATN00_13310 CDS
T04194
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00260
Glycine, serine and threonine metabolism
sbd00460
Cyanoamino acid metabolism
sbd00630
Glyoxylate and dicarboxylate metabolism
sbd00670
One carbon pool by folate
sbd00680
Methane metabolism
sbd01100
Metabolic pathways
sbd01110
Biosynthesis of secondary metabolites
sbd01120
Microbial metabolism in diverse environments
sbd01200
Carbon metabolism
sbd01230
Biosynthesis of amino acids
sbd01240
Biosynthesis of cofactors
sbd04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ATN00_13310 (glyA)
09102 Energy metabolism
00680 Methane metabolism
ATN00_13310 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ATN00_13310 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
ATN00_13310 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
ATN00_13310 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
ATN00_13310 (glyA)
Enzymes [BR:
sbd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
ATN00_13310 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ALR21126
UniProt:
A0A0S3F0C8
LinkDB
All DBs
Position
complement(2705363..2706682)
Genome browser
AA seq
439 aa
AA seq
DB search
MSTATLTQPDLSDIRSEGYFTRSLANADPAVFAGVTHELKREQNQIELIASENIVSKAVL
EAQGSVFTNKYAEGYPGKRYYQGCAPSDEVEQLAIDRAKQLFNCGFVNVQPHSGAQANGA
VMLALTKPGDTIMGLSLDAGGHLTHGAKPAMSGKWYNAVQYGVREDTHLIDYDVVEAMAV
ESKPTIIIAGGSAYPRHIDFARFRAIADKVGALFMVDMAHFAGLVAGGAHPTPFGHAHVV
TTTTHKTLRGPRGGMILTDDEAIAKKINSAVFPGLQGGPLMHVIAAKAVAFGEALRPEFK
TYAQAIVTNAKALAGKLEQRGLAVVSGGTDTHLALIDLRPYGISGKDADEALERSFITCN
KNGVPGDPLPPTKTSGIRVGSPAGTTRGFGVAEFEAIGDMIADVLEGLRDKGEAGDAAVE
ANVRERVSALTARFPIYAD
NT seq
1320 nt
NT seq
+upstream
nt +downstream
nt
atgagcacagcaaccctcacccagcctgacctgtccgacatccgttcggaaggctatttc
acgcgcagcctggccaatgccgatccggcggtattcgcgggcgtcacccacgaactgaag
cgcgaacagaaccagatagagctgatcgcatcggaaaatatcgtcagcaaggcggtgctg
gaagcgcaaggatcggtattcaccaacaagtatgcggaaggctatccgggcaagcgctac
tatcagggttgcgccccttcggatgaggtggagcagcttgcaatcgaccgcgcgaagcag
cttttcaactgcggtttcgtcaatgtgcagccccattcgggcgcgcaggccaatggcgcg
gtgatgctggcgctgaccaagccgggcgacacgatcatggggctgtcgctggacgcgggc
ggccatctgacccacggcgcaaagcccgccatgtcaggcaaatggtataatgccgtgcaa
tatggcgtgcgtgaggacacacacctgatcgactatgacgtggtcgaagcgatggcggtg
gaaagcaagccgacaatcatcatcgcgggaggcagcgcctatccgcgccatatcgacttc
gcccggttccgggccatcgcggacaaggtaggcgcgctgttcatggtggacatggcgcac
ttcgccggtctggtggcgggcggcgcgcatccaacgcccttcggccatgcccatgtcgtc
accaccactacgcacaagacgctgcgcgggccgcgcggcggcatgatcctgaccgatgac
gaagccatcgcgaagaagatcaattcggcggtattccccggcttgcagggcggtccgctg
atgcatgtcatcgcggcgaaggctgtggctttcggcgaagcgttgcggcctgagttcaag
acatacgcccaggccatcgtcaccaacgccaaggcgctggccggtaagctggaacagcgt
gggctggccgtggtttcgggcggcacggatacacatctggcgctgatcgacctgcggccc
tacggcatttcaggcaaggacgcggacgaagcgctggagcgcagcttcatcacctgcaac
aagaatggcgtgccgggtgatcccctgcccccgaccaagacgagcggcatccgcgtgggt
tcgcccgcgggcacgacgcgcgggttcggcgtggcggagttcgaggcgatcggcgacatg
atcgccgatgtgctcgaagggctgcgcgacaagggagaggctggcgatgcggcagtcgag
gccaatgtgcgcgagcgcgtttcggcgctcaccgcccgcttcccgatctatgcggattaa
DBGET
integrated database retrieval system