Sphingobium baderi: ATN00_13835
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Entry
ATN00_13835 CDS
T04194
Name
(GenBank) double-strand break repair protein AddB
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_13835
Enzymes [BR:
sbd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ATN00_13835
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ATN00_13835
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDDEXK_1
SIP
Motif
Other DBs
NCBI-ProteinID:
ALR21211
UniProt:
A0A0S3F0N8
LinkDB
All DBs
Position
2833843..2836818
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AA seq
991 aa
AA seq
DB search
MGDSSRLTLFNIPAHRSFSDALVTGILAQHGGDPIKLAQGMVLLPSNRAIRSISDAFVRK
SGGGLLLPRLVALGDAELGEQIGGALDPLGEQDAIPPSVGMMQRQMILARLVQEASPRPL
DVGQSLQLAQALGSVLDQMQVERIPVAALQDLQLSEALSAHWQRSLNLLSILLHHWPQEL
KRLGCIDLAERRNRLFDRVAERWKENPPGHFVIAAGLSTAAPAIAGLLRRIAIMPNAMVV
FAGLDQNMDEDAWKTIGPFEADPVTGRVPAGHETHPQFALKRLLDRMSATRDDVAQWRWG
SEHDARAVRGRNISNAMLPPRLTTRWRDLKTADRSLAGVEALEVATPGEEAQAIAIALRE
ALETEGKTAALVTPDRQLAVRVSAHLKRWGIEADDSAGQALSRLPPGTLLIAMAQAVAER
FAPVALLALLKHPLVMRGADRLPWLEQVRGLDLLLRGPRPQAGLNGIDLLLTPRDGEDRQ
KDLRTRIAAWWPQARSLLAPLEAAFTGAPDLSAQLSAVREQAGLLTRDAVWSGHQGRMAA
DLFAEMEAFAGDGPIQADIRALPMVLDHMLAGLSVRPPQGGHPRIAILGLIEARLMQADF
MILGGLNEGVWPGMPTPDPWLAPSIRKELGLPGLESRIGLAAHDFASGLGAPQVLITRAR
RGAGGPAVASRFWLRLKAMAGPQWKSADRYAELARNIDRPNFVRPAERPRPAPPASIRPK
LVPVTDVDRLKADPYAFYARRILRLSRLDPVDADAGPAWRGTAVHEILQRWAETATLEPA
DLESRAKAMFERPEVHPLLRALWQPRLMEAIRWIASGVARDKAEGRTILAVESEGRAEIG
GITLTGKADRIDHMPDGTLAIVDYKTGKPPSAKQVRAGFALQLGLLGLIAEHGGFPGIEG
RPVAGCFEYWSLAKKGDAFGYRESPVDPLGKRDKIVTAEFTTYVHGLFDQIAADYLNGTT
PFEAQVNPEVANYGDYDQLMRLEEWYGRDDG
NT seq
2976 nt
NT seq
+upstream
nt +downstream
nt
atgggtgatagcagccgcctcacgctgttcaacatacccgcgcaccgttccttttccgat
gcgctggtcaccggcatccttgcccagcacggcggagacccgataaaactggcgcagggc
atggtgctgttgcccagcaaccgggcgatccggtcgataagtgacgctttcgtacgaaaa
tcgggcggcggattgctgttgccccgactggtcgcgctgggcgatgcggaactcggcgaa
cagataggcggcgcgctcgatcccttgggcgagcaggatgccattcctccttcggtcgga
atgatgcagcgccagatgatcctggcacggctggttcaggaagcatcgcccagaccgctg
gatgtcgggcagtcgcttcagcttgcccaggcgctgggctcagttctggaccagatgcag
gtggagcggattcccgtcgcggctcttcaggatcttcaactttcagaagcgctttccgcc
cattggcaaaggtcgctgaacctgctttccatcctcctccatcattggccccaggaattg
aagcggctgggctgcatcgatcttgccgagagaaggaacaggctgttcgatcgcgtggcg
gagcgatggaaggaaaatccgccagggcatttcgtcattgcggcgggcctgtccacggct
gcgcccgccattgcggggcttttgcggcgcatcgccatcatgccgaacgccatggtcgtt
tttgcgggcctcgatcagaatatggacgaggacgcgtggaagaccatcggccccttcgag
gcggacccggtgacggggcgcgttccggctggccatgaaacccatcctcaatttgccctg
aaacgcctgctcgaccggatgagcgccacccgcgacgatgtggcccagtggcgttggggg
agcgaacatgatgcgcgcgcggtgcgggggcgcaacatttccaatgccatgctgccgccg
cgcctgacgacgcgttggcgcgatctaaaaacggccgaccgctcgctggcgggtgtggag
gcgttggaagtcgccacgccgggcgaggaagcgcaggctatcgcgattgccttgcgtgaa
gcattggagaccgaggggaaaaccgcggcgttggtaacgcctgatcggcaattggcggtc
cgtgtctcggctcatttgaaaagatggggcatagaggcggatgattcggcaggtcaggcc
ctttcccgcttgccgccgggcacattgttgatcgcgatggcacaggcggtcgcggaacgc
ttcgcgcccgtcgcattgctggcgctgttgaagcatccgctggtcatgcgcggcgccgat
cgcctgccctggcttgaacaggtcagaggtcttgaccttctgttgcgcggtcccaggcct
caggctggcctgaacggcatagacctgttgctcacccctcgcgatggcgaggacagacag
aaagatctgcggacgcgtatagccgcgtggtggccgcaggcccgttccttgctcgctccg
ctcgaagcggcttttaccggcgctcccgatctttccgcgcaactttccgccgttcgagaa
caggcggggttgctgacgcgcgatgctgtttggtcggggcatcagggccgcatggcagcc
gatctgttcgcggagatggaggcgtttgcgggcgatgggccgattcaggctgatattcgc
gcgcttccgatggtgctggatcacatgctggccggcttatccgtgcgcccgccgcagggc
ggccatccgcgcattgccatattgggcctgatcgaagcgcgattgatgcaggccgatttc
atgatcctgggcggcctcaatgaaggggtgtggccgggcatgcccacccccgatccgtgg
ctggcgcccagcatccgtaaggaattgggattgcccggactggaaagccgcatcggactg
gcggcacatgatttcgcgagcggactgggcgctccgcaagtcctgatcacgcgcgcgcgg
cgaggggccggggggccggcggtggcgtcgcgtttctggctgcggctcaaggccatggcc
gggccacaatggaaatcggcggatcgctatgccgaacttgcccggaacatcgaccgtccc
aatttcgtccggcctgccgagcgccccagacccgcgccgcctgcctcgatccggccaaag
ctagtgccggttaccgatgtcgaccgcctgaaggccgacccttacgccttttatgcgcgc
cgcatcctgcggctttcccggctcgacccggtggatgccgatgcggggcctgcctggcgg
gggaccgccgtgcatgaaatcctccaacgctgggcggaaacggctacgcttgaaccggcg
gatctggaaagccgcgcaaaggcgatgttcgagcggccggaagtccatcccttgctgcgc
gcgctatggcaaccgcgcctgatggaagctatccgatggatcgcttcgggagtggccagg
gataaggcggaagggcggaccatcctggcggttgaaagcgagggcagggcggaaatcggt
ggcatcaccctgacaggaaaggctgaccgcatcgaccatatgcccgacggaacgctggcc
atcgtcgattacaagacgggcaaaccacccagcgcgaagcaggtccgggccggatttgcg
ctccagctcgggctgttggggctgattgctgaacatggcggctttccgggcatcgaaggc
cgccctgtcgccggatgctttgaatattggtcgctggccaagaagggcgatgccttcggc
tatcgggaaagcccggtcgatccgctgggcaagagggacaagattgtgacggccgaattc
actacctatgtccatggtctcttcgatcagatcgcggcggattatctgaacggaaccaca
cccttcgaggctcaggtcaatccggaagtggccaattatggtgattatgaccagttgatg
cggctggaggaatggtatggccgcgacgatggttag
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