Sphingobium baderi: ATN00_14165
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Entry
ATN00_14165 CDS
T04194
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbd03032
]
ATN00_14165
03036 Chromosome and associated proteins [BR:
sbd03036
]
ATN00_14165
03400 DNA repair and recombination proteins [BR:
sbd03400
]
ATN00_14165
DNA replication proteins [BR:
sbd03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ATN00_14165
Chromosome and associated proteins [BR:
sbd03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
ATN00_14165
DNA repair and recombination proteins [BR:
sbd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
ATN00_14165
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
Utp8_C
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ALR22650
UniProt:
A0A0S3F4L4
LinkDB
All DBs
Position
2905444..2905731
Genome browser
AA seq
95 aa
AA seq
DB search
MIRSELIQKLTDENPELGLQEVERIVDLFFKEIVDRLSTGGRVELRGFGAFTTRAREART
GRNPRTGEKVPVSAKRVPYFKPGKEMRERLNKAHV
NT seq
288 nt
NT seq
+upstream
nt +downstream
nt
atgatccgctctgaactgatccagaagttgacagacgaaaatccggagctcggccttcag
gaggtggagaggattgtcgatctctttttcaaggagattgtcgatcgcctgtcgaccggc
ggaagggtggaattgcgcggcttcggcgcgttcacgacacgagcgcgagaagcacgaacg
ggccggaatccccgcacgggtgaaaaggttcccgtttctgccaagcgggtgccctatttc
aaaccgggcaaggaaatgcgggaacgtcttaacaaggcgcatgtctga
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