Sphingobium baderi: ATN00_16220
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Entry
ATN00_16220 CDS
T04194
Name
(GenBank) carbamoyl phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00220
Arginine biosynthesis
sbd00240
Pyrimidine metabolism
sbd00250
Alanine, aspartate and glutamate metabolism
sbd01100
Metabolic pathways
sbd01110
Biosynthesis of secondary metabolites
sbd01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
ATN00_16220
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ATN00_16220
00220 Arginine biosynthesis
ATN00_16220
Enzymes [BR:
sbd01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
ATN00_16220
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATP-grasp
ATP-grasp_3
ATPgrasp_Ter
ATP-grasp_4
RimK
CoA_binding_2
ATP-grasp_5
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
ALR21609
UniProt:
A0A0S3F1N9
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All DBs
Position
complement(3326958..3330293)
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AA seq
1111 aa
AA seq
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MPKRTDISSILIIGAGPIIIGQACEFDYSGTQAVKALKEEGYRIILVNSNPATIMTDPEF
ADATYVEPITPEIVAKIIEKERPDAVLPTMGGQTALNTALALFNDGTLEKYGVQMIGADA
EAIDKAEDRIKFRDAMDKIGLESARSRIAHTMEEAMEALEFTGLPSIIRPSFTMGGTGGG
IAYNRDEFMSIVRGGLDASPTTEVLIEESLLGWKEYEMEVVRDRADNAIIICSIENIDPM
GVHTGDSITVAPALTLTDKEYQIMRNASIAVLREIGVETGGSNVQFAVNPKDGRLVVIEM
NPRVSRSSALASKATGFPIAKVAAKLAVGYTLDEIENDITGATPASFEPTIDYVVTKIPR
FAFEKFKGSEPLLGTAMKSVGEVMAIGRNIHESMQKALRGLETGLSGFDNVHHLEGASRD
DIIAALAQPTPDRLLVAAQALREGLSVEEIHAVAKYDPWFLERIKEIVEAEADVLANGLP
QDADGMRRLKSMGFSDKRLAGLALKSANLRGMERGIARGGGLIHDAVVAMTGGVTENEVR
GLRHKLGVRPVFKRIDTCAAEFEAKTPYMYSTYEAPIFGEAENEAQPTDRNKVVILGGGP
NRIGQGIEFDYCCVHACFALSEAGYETIMINCNPETVSTDYDTSDRLYFEPLTAEDVLEI
LNVEMSNGTLKGVIVQFGGQTPLKLAQALEDAGIPILGTSPDAIDLAEDRERFAALIDKL
KLKQPANGIARSREEAIAVANRIGYPVLMRPSYVLGGRAMEIVDGQAQLEEYITTAVQVS
GDSPVLIDQYLRDATEVDVDALCDGDDVVVAGVLQHIEEAGVHSGDSACSLPPYSLPDDV
IAEIERQTEVLAHALHVRGLMNIQYAVKDGTVYLIEVNPRASRTVPFVAKAIGTPIAKIA
SRVMAGEKLKDLPKIDRNAIDHVAVKEAVFPFARFPGVDPVLSPEMKSTGEVMGIDSNFA
TAFAKSQLGAGMVLPTQGTVFISLKDSDKPVILPAARKLVDMGFKIIATGGTARFLEDNG
IPIETVNKVAQGRPHIVDRITDGGVDLIFNTTEGWQSLKDSKAIRTSALRQKVASFTTAA
ASLAAADAIEALRGHALEVRSLQSYYPRPQA
NT seq
3336 nt
NT seq
+upstream
nt +downstream
nt
atgcccaaacgcaccgacatttcctccatcctcatcatcggcgcggggccgatcatcatc
ggccaggcgtgcgagttcgactattcgggcacgcaggcggtgaaggcgctcaaggaagag
ggctatcgcatcatattggtgaactccaacccggccacgatcatgaccgacccggaattc
gccgacgccacctatgtcgagccgatcacgccagaaatcgtggcgaagatcatcgagaag
gagcggccggacgcggtgctgccgaccatgggcgggcagacggcgctcaacacggcgctg
gcgctgttcaatgacggcacgctggagaaatatggcgtccagatgatcggcgcggacgcc
gaggcgatcgacaaggcggaagaccggatcaagttccgcgacgccatggacaagatcggc
ctggaaagcgcccgctcgcgcatcgcccacacgatggaagaggcgatggaggcgctggag
ttcaccggcctgccgtcgatcatccgtcccagtttcaccatgggcggcacgggcggcggc
atcgcctataatcgcgatgagttcatgagcatcgtgcggggcggcctcgacgcttcgccc
acgaccgaggtgctgatcgaggaatcgctgctcggctggaaggaatatgagatggaggtg
gtgcgcgatcgcgccgacaacgccatcatcatctgttccatcgagaatatcgacccgatg
ggcgtccataccggcgactccatcaccgtcgcgcccgctttgacgctgacggacaaggaa
tatcagatcatgcggaacgcgagtatcgcggtcctgcgtgaaatcggcgtggaaacaggt
ggttccaacgtacagttcgcagtcaatccgaaggatggccgcctggtcgtcatcgagatg
aacccgcgcgtttcccgttcttccgcgctggcttcgaaggccaccggcttcccaattgcg
aaagtcgcggcgaagctggcagtcggctatacgctggacgagatcgagaacgacatcacc
ggcgcgacgcccgcgagcttcgaaccgaccatcgactatgtcgtgaccaagatcccgcgc
ttcgccttcgagaaattcaaggggtctgagccgttgctcggcaccgcgatgaagtcggtg
ggcgaggtgatggccattggccgcaacatccatgaatccatgcagaaggctctgcgcggg
ctggaaacgggcctatctggcttcgacaatgtccatcatctggaaggcgcgtccagagac
gacatcatcgccgcacttgcccagccgacgcccgaccgcttgctggtcgccgcgcaggcg
ctgcgcgaagggctgagcgtcgaggaaatccacgccgtcgccaaatatgatccctggttc
ctcgaacggatcaaggagattgtcgaggccgaagcggacgtgttggcgaacggcttgccg
caagatgcggatgggatgcgccgcctcaaatccatgggtttttccgacaagcggctggca
gggctggctctcaaatccgccaatctgcgtggcatggagcggggcatcgcacggggcggc
ggcctgatccatgacgcggtcgtcgccatgaccggcggcgtgacggagaatgaagtgcgc
ggcctgcgtcacaaactgggggtgcgtccggtattcaagcgcatcgacacctgcgccgcc
gagttcgaggcgaagacgccttatatgtattcgacctatgaagcgccgatctttggcgag
gcggagaatgaggcgcagcccaccgaccgcaataaggtcgtgatcttgggcggcgggccg
aaccggatcgggcaggggatcgagttcgactattgctgcgtccacgcctgcttcgcgctc
agcgaagcgggttatgaaacgatcatgataaactgtaacccggagacggtttcgaccgat
tacgatacgtcggaccgcctctatttcgaaccgctgacggctgaggacgttctggaaatc
ctgaacgtcgaaatgtcgaacggaacgctgaagggcgtcatcgtgcaatttggcggccag
actccgctcaagctggcgcaggcactggaggatgcagggattccgatcctgggcacgtcg
cccgacgccatcgaccttgccgaggatcgcgagcggttcgcggcgttgatcgacaagctg
aaactgaagcagccagctaacggcatcgctcgttcgcgggaagaggcgatcgccgtcgcc
aaccggatcggctatccggtgctgatgcgtccgtcctatgttctgggcggccgcgcgatg
gagatcgtcgacggtcaggcgcagcttgaggaatatatcacgaccgccgttcaggtgtcc
ggcgactcgccggtgctgatcgaccagtatctgcgcgatgcgaccgaggtggacgtggat
gcgctgtgcgatggcgacgatgtggtggtcgcgggcgtgcttcagcatatcgaggaggcg
ggcgtccattcaggcgacagcgcttgttcgctgccgccttacagcctgcccgacgacgtc
attgcggagatagagcggcagaccgaggtgctggcccatgcgctgcatgtccgcggcctc
atgaacatccagtatgcggtcaaggacggcaccgtctatctgatcgaagtcaatccgcgc
gccagccgcacggtgcccttcgtcgccaaggccatcggcacgcccatcgccaagatcgcc
agccgcgtgatggcgggggagaagcttaaggacctgccgaagatcgaccgcaacgctatc
gatcatgtcgcggtcaaggaagcggtgttccccttcgcgcgcttccccggcgtcgatccg
gtgctctcacctgaaatgaagagcacgggtgaagttatgggaatcgatagtaattttgcc
acagctttcgccaaatcgcagcttggcgccggcatggtgctcccgacgcagggaacggtg
ttcatttcgctcaaggacagcgacaagccggtgatcctgccggcggcgcgcaagctggtc
gacatgggcttcaagatcatcgctacgggcggtacggcacgctttctggaagataacggc
atcccgatcgaaacggtgaacaaggtggcgcagggccgcccgcacatcgtcgaccggatc
accgatggcggcgtggacctgattttcaacacgaccgaggggtggcagtcgctaaaagat
agcaaggcgatccgtaccagcgcgctgcggcagaaggtcgcgagcttcaccacggcggct
gccagcctggcggcggcggacgcaatcgaggcgttgcgcggccatgcccttgaagtgcgc
tcgctccagtcctattatccaaggccgcaagcctga
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