Sphingobium baderi: ATN00_19210
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Entry
ATN00_19210 CDS
T04194
Name
(GenBank) TonB-dependent receptor
KO
K16092
vitamin B12 transporter
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sbd02000
]
ATN00_19210
Transporters [BR:
sbd02000
]
Other transporters
Pores ion channels [TC:
1
]
ATN00_19210
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
DUF5590
DUF3575
Motif
Other DBs
NCBI-ProteinID:
ALR22124
UniProt:
A0A0S3F358
LinkDB
All DBs
Position
complement(3936549..3938402)
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AA seq
617 aa
AA seq
DB search
MLKSGLPLMALLAATPALAQDDDIVVTASGIEQPRDEVGQAISVIDADTIRTRQAVDVTD
LLMTTPGVRFNRSGTTGAATGVSLRGAETTQTLVLIDGVKVNDPSGIGDGYDFGHLLVGN
IRRIEVLRGSNSVVYGSQAIGGVVNVMTGTPAEGYAANASVDYGYSDTLNAKADVSGTSG
IASGGVGMAYFRTDGISSAARSFGATEKDGYKNIAANAKLKLSFTDTLSLDLRGYYIHAD
LDYDSFFGAPADSADISKSDQYVGYAGINLALLDGKLTNRTAVTWFRNDRDYYFVRGTDP
DYGYSGTNLRFEYEGVYAPVDQAKLVFGYEHERPDYDFFGFGDTSSAKANIDSVYALAIV
KPVAGLSVTGGVRHDDHSQFGGATTFGANANYTPNHGATNFRLSYGEGFKAPSLYQLYDM
FSGNADLKPERSKSYDIGFDQSLDDGRAMLSVTAFRRDTRNQINYDNNSFLYGNLDRTRA
KGVEATLTLKPVDALILTGSYSYIDARDRSPGSVDEGKRLLRRAANAVSVSADYAWPFGL
STGATITMVGDSFDLDASRNRVQLDGYAIVGLRASFPIGEHLEIYGRIDNLSDQEYATAY
GYGVYGRSAYGGVRVRF
NT seq
1854 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaatcgggattgccgctcatggcattgctggcggccacgcctgcgttggcgcag
gatgacgatattgtcgtcaccgcatcgggcattgaacagccgcgggacgaggtggggcag
gcgatcagcgtgatcgacgccgacaccatccgcacgcggcaggcggtcgatgtgacggat
ttgctgatgacgacgccgggtgtgcgtttcaatcgttcgggcacgaccggcgcggcgacg
ggcgtgtcgctgcgcggcgcggaaacaacgcagacgctggtgctgatcgacggcgtgaag
gtcaatgatcccagcggaattggcgacggctatgatttcggccatctgctggtcggtaat
atccgccggatcgaagtgctgcgcggttccaactctgtcgtctatggcagtcaggcgatt
ggcggcgtggtcaatgtgatgacgggcacgcccgctgaaggctatgccgccaatgcctcg
gtcgattatggttatagcgatacgctgaacgccaaggccgatgtgtctggcaccagcggc
atcgcttcgggcggcgtgggcatggcctatttccgtaccgatggcatttcctcggcagcg
cgctcctttggcgccacggaaaaggacggctacaagaacattgccgccaatgcgaagctc
aagctcagcttcaccgatacgctcagcctcgacctgcgcggctattatattcatgccgat
ctcgattatgacagcttcttcggcgcacccgccgacagcgctgacatcagcaaatcggac
caatatgtcggctatgccggcatcaatctcgctctgctcgacggcaagctgaccaatcgg
acggcggtcacctggttccgcaacgaccgcgactattatttcgtgcgcggcacggacccc
gactatggctatagcggcaccaacctgcgcttcgaatatgaaggcgtctatgcgccggtc
gatcaggcgaagctggtcttcggctatgagcatgagcggcccgattatgatttcttcggc
ttcggcgacacatccagtgcgaaggcgaatatcgacagcgtctatgccctggccatcgtg
aagccggtcgcggggctgtctgtcaccggcggcgtgcgtcatgacgatcacagccagttc
ggcggcgcgacaacctttggcgcgaacgccaattatacgcccaaccatggcgcgaccaat
ttccgcctgagctatggcgaagggttcaaggcgccttccctctatcagctttacgatatg
ttcagcggcaacgcggacctgaagccggaaaggtccaaaagctacgatatcggctttgac
cagagcctggacgatgggcgggcgatgctgtcggtcaccgctttccgccgcgatacgcgc
aaccagatcaactatgacaataacagcttcctctatggcaatctcgaccgcacccgcgcc
aagggtgtggaggcgacgctgacattgaagccggtcgatgcgctcattctcaccggttca
tatagctatatcgacgcgcgagaccggtcgcctggcagcgtggatgaaggcaagcgcctg
ctgcgccgcgccgccaatgcggtcagcgtgtcggcggattatgcgtggcccttcggcctc
agcaccggcgcgacgatcactatggtgggcgacagtttcgacctggacgcgagccggaac
agggtgcaactggacggctatgccattgtcggcctgcgcgcatccttcccgatcggcgag
catctggagatatatggccggatcgacaatctgtcggatcaggaatacgccacggcctat
ggctatggggtctacggccggtcggcctatggcggcgtgcgtgtccgcttctga
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