Sphingobium baderi: ATN00_19280
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Entry
ATN00_19280 CDS
T04194
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00300
Lysine biosynthesis
sbd00470
D-Amino acid metabolism
sbd01100
Metabolic pathways
sbd01110
Biosynthesis of secondary metabolites
sbd01120
Microbial metabolism in diverse environments
sbd01230
Biosynthesis of amino acids
Module
sbd_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
ATN00_19280
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
ATN00_19280
Enzymes [BR:
sbd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
ATN00_19280
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GFIT
Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
ALR22136
UniProt:
A0A0S3F3S8
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All DBs
Position
3951194..3951994
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AA seq
266 aa
AA seq
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MGRFSKMHGLGNDFVVIDARDGAVEMTASRARAIADRHAGIGCDQLILIGASERADVSMR
IFNADGSEVEACGNATRCVPLFVGRDVRIETKAGLLDAKGVEGGASVDMGAPRFDWDAIP
LAYAMDTLTMPASWEDLPAPAAVNVGNPHVIFFCDDLDVVDIPRLGSIIENDPLFPQRVN
VNFAEVAGDNHLRLMVWERGAGLTRACGTGACATAVAAIRSKLMAGPVTVSLPGGDLAID
WTPGGTIRMTGPATHVFNGEADWTRF
NT seq
801 nt
NT seq
+upstream
nt +downstream
nt
atgggacgcttttcgaagatgcatggcctcggcaacgacttcgtggtgatcgatgcgcgg
gatggcgcggtcgagatgacggcgtcgcgcgcccgcgccattgccgatcgccatgcgggc
atcggctgtgaccagttgatcctgatcggcgcgtccgagcgcgccgacgtgtcgatgcgg
attttcaacgcggacggcagcgaggtggaagcctgcggcaacgcgacgcgctgcgtgccg
ctgttcgtgggccgcgacgtgcggatcgaaacgaaggcgggcctgctcgacgcgaagggc
gtggaaggtggcgcaagcgtcgacatgggcgcgccgcgcttcgactgggatgccatcccg
ctggcttatgccatggacacgctgaccatgcccgccagctgggaagacctgcccgcgccc
gccgccgtcaatgtcggcaatccccacgtcatctttttctgcgacgatctggatgtggtc
gatattccgcgcctgggttcgatcatcgagaatgatcccctctttcctcagcgcgtgaac
gtcaatttcgcggaagtcgcgggcgacaatcatctgcgcctcatggtctgggagcgcggt
gcgggcctgacgcgggcctgcggcacgggcgcctgcgccaccgccgtcgcggcgattcgg
agcaagctcatggctggtcccgtgacggtcagcctgcccggcggcgaccttgcgatcgac
tggacgccgggcggcaccattcgcatgaccggcccggccactcatgtctttaacggcgag
gctgactggacccgcttctag
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