Sphingobium baderi: ATN00_20080
Help
Entry
ATN00_20080 CDS
T04194
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbd03036
]
ATN00_20080
Chromosome and associated proteins [BR:
sbd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
ATN00_20080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALR22811
UniProt:
A0A0S3F568
LinkDB
All DBs
Position
pDE1:8173..12396
Genome browser
AA seq
1407 aa
AA seq
DB search
MRDLLDLTHVNDAPAARTIATLLAADGAITRRQLNDAMVQAFGGSDADGRWTQRDSFEML
EHALALHLASDGHRVDTLADIAASSALMQRLPTQTVRSEEQIELQQFSTPADIAALAMLF
AAIGAEDVVLEPSAGNGLLIAQAPRGRVLQLNEIDPRRRERLAHIFPDATITGHDGAALV
ALHADLPRPSVALMNPPFSRSIGRGADDLAALRHLQAAIKRVTPGGRVVAIMPDWFAPCA
RLRTAYETILTGCTVRASLRLEHCYRKHATDIAVRLYVIDKIAGELTPAVIERAAVPDFL
DVVDIPARIKLEPSANLPVRSAPAMPTSLFGAARRTRVAAPRPYHAPKANAVLPVGYRKL
ETPAPLAEQVGVYLPYRPSRIVFDAAGEHPTALVESVAMGSIPAPIPTHIPHLPERTVSE
RLLSSSQLETVVYAGHAWNQTLPGTFKPAKEGVGLDIDPEGRKYRKGFFLGDGTGAGKGR
QIAACILDNKLQGRRRHIFVTKNEPLLEDIRRDVTALGGLSADVQPLSNWKIGQPVTMDE
GTLFVTYPGLRSGRSDATRLQQILDWAGPDFDGVIAFDEAHEMGGVAGGEGALGKTEGSQ
QGICGVLLQNHLPDARVLYASATGASDVNNLAYAVRLGLWGPETSFPNRESFISNIRQGG
IAAMELVARDLKALGLYTARALSFAGVEYEVLRHELTPAQIEIYDTYCRAWQVINTNLAA
ALEATNVIDSLAGKTLNSGAKAAARSRLEGTRQRFFGQVLLSMKLPSVIAAIEGHLKQEH
SVVVQLVTTAEAILDRRLSEMTAEERAEPQIELSPTDQIVDYLKRAFPTHQMEVFKDDTG
ALHSRPMRDEDGNPVHNPEAMAARDNLIEHLCALPPIKSGLDALIEHFGPDRIAEVTGRS
KRLITGPDGRQKVETRNARTSQAEASAFMNDQKKVLVFSDAGGTGRSYHASLEAVNQDRR
AHFLLEPGWRADRAIQGLGRTHRTHQASTPLFRPVTTDCKGELRFTSTIARRLDSLGALT
RGQRQTGGQGLFDPADNLESDYARDALVSWFHLLYHGKLKSTNMTEFVDLSGLEITEGDG
VLKEDLPPIQRWLNRLLALPIALQNKIFEEYLTLVETRVAAAREAGTLDVGVETITADSA
RVISDTVLRTDPGTGATTHLLTIEIARRKNPISLERILDMVRWRENPAFVMNAKSGRVAL
RSKANAWMDDEGEPILRIELQRPCSRKSMREADLFETAWEEIDEDTFRAKWQAEVEEAAE
QLETETVRLATGLLLPIWSALPSDHLAVNRIVDKNGNSWLGRIVFEHSTVDLFTKLGLAS
SEEMPVEAITNAVLAGRRVNVTRPFAMAFKRSHVNGNPRVEIVDAPAAQLAWLKSLGAFT
EIIQYRTRVFIPVAQAEAIIAEILKPS
NT seq
4224 nt
NT seq
+upstream
nt +downstream
nt
atgcgcgaccttctcgatctcacgcacgtcaatgatgcgccggcagcgcgcacgatcgcc
acccttctcgccgccgatggcgcaatcacccgccgccaattgaacgatgccatggtgcag
gcattcgggggtagcgatgcggacgggcgctggacccagcgcgacagcttcgagatgctc
gagcacgcccttgcccttcaccttgcaagcgatgggcatcgtgtcgacacactggcagac
atcgccgcctccagcgcactgatgcagcgcctaccgacccagaccgtgcgcagcgaagaa
cagatcgagctgcagcagttctctacccccgccgacattgccgccctggccatgctgttc
gccgcgatcggcgccgaggacgtcgtactcgagccgagtgccggcaacggcctccttatc
gcccaggccccgcggggccgcgtccttcagctgaacgaaatcgacccgcgccgccgcgaa
cggctcgctcacatctttcccgatgcgacgatcaccggccatgatggcgctgcgctggtc
gcgcttcacgcggatcttccgcgcccgagcgtcgccctcatgaacccgccgttctcgcgc
agcatcggccgcggcgccgatgacctggccgcgctgcgccatctgcaggccgccatcaag
cgggtcacccctggcggccgcgtcgtcgccatcatgcccgactggttcgcgccctgcgcg
cggttgcgcacggcctacgagacaatcctgaccggctgcaccgtgcgcgcatcgcttcgt
ctcgagcactgctaccggaaacatgccaccgacattgccgttcgcctctatgtcatcgac
aagatcgccggcgaactcacgcctgcggtcatcgagcgcgccgccgtccccgacttcctc
gatgtcgtcgacatccccgcccgcatcaaactggagccctccgccaaccttccggttcgc
tctgcgcctgccatgccgacttcgctgttcggcgccgcgcgcaggaccagggtggccgcg
ccgcgcccctatcacgcgcccaaggccaatgcggtcctgcccgtcggctatcgcaagctc
gaaacgccggcacctctggccgaacaggtcggcgtctacctgccctaccggccaagccgt
atcgtcttcgacgcagcgggcgagcacccgacagcgctcgttgaatcggtggccatgggc
tcgatcccggcgccgatccccacgcacatcccacatctgcccgaacgcaccgtcagcgag
cggctcctgtcctcctcccaactcgagactgtcgtctatgcgggccatgcctggaaccag
acgcttcccggcaccttcaagcccgccaaggaaggcgttggcctcgacatcgaccctgaa
ggtcgcaagtaccgcaaaggcttcttcctcggtgacggcactggcgcgggcaaaggccgc
cagatcgctgcgtgcatcctcgacaacaagctgcagggccgccgccgccacatcttcgtc
accaagaacgagccgctgctcgaggacatccgccgtgacgtcacagcgctcggcggcctg
tcggccgacgtgcagccgctctcgaactggaagatcggccaacccgtcacgatggacgaa
ggcaccctgttcgtcacctatccggggctgcgatcaggccgctcggatgcaacccgtctt
cagcagatcctcgattgggcagggcccgacttcgatggggtgatcgccttcgacgaggct
cacgaaatgggcggtgtagcagggggcgagggcgcccttggcaagaccgaaggctcccag
cagggcatatgcggcgtcctccttcagaaccaccttcccgatgcgcgtgtcctctatgcc
tctgcaaccggggcttccgacgtcaacaacctggcctacgccgttcgccttggcctctgg
gggccggagacctccttccctaatcgggaatcgttcatctccaacatccgtcaaggcggc
atcgcggcgatggaactggtggcccgcgacctcaaggcgcttggcctctacacggcgcgc
gcgctcagtttcgccggcgtcgaatacgaagtgctgcgccacgaactgacgcccgcccag
atcgagatctacgacacctattgccgcgcctggcaggtcatcaacaccaaccttgccgcc
gcgctcgaggcgaccaacgtgatcgacagccttgcgggcaaaacgctcaactcgggcgcg
aaagcggcagcgcgctcgcgtctcgaaggcacgcgccagcgcttcttcggccaggtgctg
ctttcgatgaaactccccagcgtgatcgcggcgatcgaggggcacctgaagcaggagcat
tccgtggtcgtgcagttggtgacgacggccgaggccatcctcgacaggcgtttgtccgag
atgacggccgaggaacgcgcagagccgcagatcgagttgtcgccgacggaccagatcgtc
gattacctcaagcgtgccttcccgacacaccagatggaggtgttcaaggacgatactggc
gccctgcattccaggcccatgcgcgatgaagacggcaacccggtccacaaccccgaagcc
atggccgcgcgcgacaacctgatcgagcatctttgcgcgcttccgccgatcaagtcgggc
ctcgatgccctgatcgagcatttcggaccggatcggatcgccgaagtcaccgggcgttcc
aagcgcctgatcaccgggccggacggccgccagaaggtcgagacacgcaacgcccgtacc
agtcaggccgaggccagcgccttcatgaacgatcagaagaaggtgctcgtcttctccgat
gccggcggcacgggccgatcctaccatgccagcctcgaggcggtgaaccaggaccggcgc
gctcatttcctgctcgagccgggctggcgcgctgaccgggcgattcagggtctcggccgc
acgcaccgtacccatcaggcatcgacgccgctgtttcgtcccgtcaccaccgactgcaag
ggcgagctgcggttcacctcgacgatcgcccgccgcctcgacagccttggcgccctcacg
cgcggccagcgccagaccggaggccagggcctcttcgatcccgccgacaacctcgaaagc
gattatgcgcgcgacgccctcgtctcgtggttccaccttctctatcatggcaagctcaag
agcacgaacatgaccgagttcgtcgacctgagcggacttgagatcaccgagggcgacggc
gtcctgaaggaagacctgccgccaatccagcgctggctcaatcgcctgctggcgctgccg
atcgcgctgcagaacaagatcttcgaggaatatctcacccttgttgaaacccgcgtcgcc
gctgcgcgcgaggccggcaccctcgatgtcggtgtcgagacgatcacggccgatagcgcc
cgcgtcatcagcgacacggtcctgcggaccgatcccggcaccggcgccaccacccacctt
ctcacgatcgagattgcacggcgcaagaacccgatttcgctcgaacgcatcctcgacatg
gtccgctggcgcgagaacccggcattcgtcatgaacgccaagtcgggccgcgtagcgctg
cgcagcaaggcaaacgcctggatggacgacgaaggcgagccgattcttcgcatcgagttg
cagcgcccctgcagccgcaagtccatgcgcgaggcggatctgttcgagacggcctgggag
gagatcgacgaagacacgttccgggccaagtggcaggccgaagtcgaagaggcggctgag
cagctggagaccgagacggtgcgcctcgcaaccggcctcctgctgccgatctggtcggcg
ctgccgtccgatcacctcgcggtcaaccggatcgtcgacaagaatggcaacagctggctt
ggccgtatcgtcttcgagcacagcaccgtcgacctcttcactaagctcggccttgcaagc
agcgaggagatgcctgtcgaagcgatcaccaacgccgtcctcgcagggcgcagagtcaac
gtgacccgcccgttcgcgatggccttcaagcgctcgcatgtgaacggcaacccgcgtgtc
gagatcgtcgacgctccggcagcccagcttgcatggctcaagtcgctcggcgcgttcacc
gagatcatccagtaccgcacccgcgtcttcatcccagtcgcgcaggccgaggccatcatc
gccgaaatcctcaagccctcctga
DBGET
integrated database retrieval system