Sphingobium baderi: ATN00_20580
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Entry
ATN00_20580 CDS
T04194
Name
(GenBank) methylase
KO
K26273
protein strawberry notch
Organism
sbd
Sphingobium baderi
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sbd03036
]
ATN00_20580
Chromosome and associated proteins [BR:
sbd03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
ATN00_20580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
ALR22896
UniProt:
A0A0S3F5J5
LinkDB
All DBs
Position
pDE1:96087..100286
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AA seq
1399 aa
AA seq
DB search
MATQPLALTLPLDDPARTAAQGIADRLSEGRSVARNDLLAGMTSAFGGSSADGSWSLRDA
YDVLELAQILHLKNTTLPADANVRLAQLIAMTAALPTHSVRSETQVAFQQFSTPAPIGFL
AARAAAITARDIVLEPSAGTGLLAVHGHFAGARLLLNEIDAWRARLLRHALPEGTLSTHD
GELIDDMLDPQLVPSVVLINPPFSRSQGRGRDRHAALRHLRSALLRLAPGGRCAVILPDR
IETGDADWLHATAGAHLRLHLDLPPNAYAKHGTGQAVQLILLEKGGAGDCVPRQTCTTFG
AALAAIDAMATPCAPTPQPISRPSGLFRGLTRRTRPVSSRVAVTLPTTRAVAYHRLDEPA
PAGEPQGIYLPYRPSRLLIADAREHPSALVESQAMGSIAAPPVAYEPVLPARILDDGLLS
DAQLETLIYAGAAFERDLPGRFVSSEEGLSLSPAEAGNAYRTGFFLGDGTGAGKGRQVAG
VILDQWLRGNRRHLWISKSETLIEDARRDWSALGGLPLDIQHLNQWKLGTPIALGDGILF
LTYATLRSNRGDRGTRLRQLIEWMGEDFSGVIVFDEAHDMAGVAGGEGRFGATKGSEQGI
AGVRLQNLAPRARILYASATGASDVNNLAYATRLGLWGPQTAFADRRAFVESLRRGGIAA
MELIARDLKAQGLYAARALSFAGVEYDILEHRLSEEQIAVYNAYADAWAIIHNNLQAALA
ATRVTDGFSGATYNSGAKAAALSIFESTKQRFFGQILLSMKLPSLIPAIAADLARGDCAV
VQLVSTSEAMLDRALADLSPEERAWLDIELSPREFLVDYLTATFPVRQMRTYTDDSGTVR
SEPMIDEAGQPVLCREAIAMRDQLLEQLCALPVVGSALDHIIGHFGTEAVAEVTGRSRRI
IVDAEGRQRIERRSARTNLAETDSFMRGEKRILIFSDAGGTGRSYHASLDALNQRRRIHY
LLEPGWRADAAIQGLGRTHRTHQASPPLFRPVSTDCRGERRFISTIARRLDSLGALTRGQ
RQTGGQGLFDPRDNLESDFARESLDQWFRLLFQGKLQSVRFDQFQTLTGLNLAGEGGGLT
ETLPTIQRWLNRILALRIDLQNAIFDEYLGLIEARVEKAREAGTLDLGVETIAADRISIL
DRTVIRRDPVSGAETEILRIETEERYRPLPLERAHWLLADPEARRLINPRSGKAAICRPT
FSLTDEEGRTVRRYELVRPTRTERHRQDLFAETHWTDVDRASFDEAWQAECDAMAAQTRT
QIIYLVTGLLLPVWGKLPDDHVQVWRLTSDDGQSLLGRLIPAPLVERIAGAFGIAAHVEI
DLNARVEHVRTSGEIMPIGALRLKRALVAGDQRLELLDWKPEALPHLKAVGCFTEIIQHR
TRLFVPSSRAVEILDGLAG
NT seq
4200 nt
NT seq
+upstream
nt +downstream
nt
atggccacacaacccctcgcgctcacgctgccgctcgatgatcccgcccggaccgctgct
caaggcatagccgaccggctgtccgaaggccgttcggttgcacgtaacgacctccttgcc
gggatgacctccgccttcggtggctcgagcgcggatggctcatggtcattgcgcgacgcc
tatgatgtgctcgaactcgcgcagatactccatctgaagaacacaacactccccgcagat
gcgaatgtgcggctcgcccagctgatcgccatgacggcggcgcttccgacgcacagcgtg
cgtagcgaaacgcaggtcgcgttccagcaattctcgacaccggcaccgatcggcttcctt
gccgccagggcagccgcgatcacggcacgcgatatcgtgctcgagccctcggccgggacc
gggctcttggccgtacacggtcattttgccggcgctcgccttctcctcaatgagatcgat
gcctggcgcgcgcgtttgctgcgtcatgcccttcccgagggcacattgagcacgcatgac
ggcgaattgatcgacgacatgctcgatccgcaactggtgccgagcgtcgtgctcatcaac
ccgcccttctcgcggagccagggacgggggcgcgaccgccatgccgcgcttcgccacctg
cgctccgcgctcttgcgcctcgcaccaggcgggcgctgcgccgttattcttcccgatcgc
atcgagacaggggacgcggattggctgcacgccaccgcgggcgcacatctccggctgcat
ctcgacctgccgcccaatgcctatgccaagcacggcaccgggcaagcggttcagctcatt
ctcctcgaaaagggcggggcaggggattgcgtcccacgccagacctgtacgacgttcggc
gctgcgctcgcggccatcgatgcgatggcgaccccgtgcgcccccacgccgcaaccgatc
tcccgccccagcggattgttccggggcctcacgcggcggacccgccccgtaagctcgcgt
gtggcggtaaccctgcccacgacccgcgcggtcgcctatcaccgtctcgatgagcccgcg
cccgcgggcgaaccgcaagggatttacctgccctatcggccgagccgtctgctgattgcc
gatgcccgtgagcacccaagcgcgctggtcgaatcgcaggcaatgggatcgattgccgca
cccccggtcgcttatgaacccgtgctgccggccaggatcttggacgacggcctgctctcg
gacgcgcagctcgaaacgctgatctacgctggcgcggcgttcgagcgtgaccttccgggc
cggttcgtatctagcgaggaggggctttcgctgtcgccggcagaggccggcaatgcctat
cggacgggctttttccttggcgatggcacgggcgccggcaaggggcggcaggtggcgggc
gtcatcctcgaccagtggttgcgcggcaaccgccgccacctctggatatccaagagcgag
acgctgatcgaagacgcgcggcgcgactggtcggcgcttggcggcttgccgctcgacatc
cagcatctcaaccagtggaagctcggcaccccgatcgcgctgggcgatgggatcctcttc
ctgacctatgccaccctgcgctccaaccgcggtgacaggggcacgcggctgcgccagctg
atcgaatggatgggtgaggatttcagcggcgtcatcgttttcgacgaggcgcatgacatg
gccggggtggccggtggagagggccggttcggcgccacgaaaggatccgaacagggcatc
gccggcgtccgcctccaaaatctcgctccgcgcgcccggattctctacgcttcggcgacg
ggcgcctcggacgtcaacaacctcgcttatgcgacacgcctcggattgtggggaccgcag
acggccttcgccgaccggcgggccttcgtggaatcgcttcgccgcggcggcatcgcagcg
atggagttgatcgcccgcgacctcaaggcgcagggcctctatgccgcgcgggcgctcagc
ttcgccggcgtcgaatatgacatcctcgagcatcggctcagcgaagaacagatcgccgtc
tacaatgcctatgccgatgcctgggcgatcattcacaacaatctgcaggccgcgctcgcc
gccacgcgcgtcaccgacggtttcagcggtgccacctacaatagcggcgcgaaggccgcg
gcattgtcgatcttcgaatcgaccaagcaacgcttcttcggccagatcctgctgtcgatg
aagctgccgtcgctgatcccggcgatcgccgccgatctcgcgcgcggcgactgcgccgtc
gtccagctcgtgtcgacctcggaagcgatgctcgatcgtgcccttgccgacctgtccccc
gaggagcgggcctggctcgatatcgagctgtccccgcgcgaattcctggtcgactatctg
acggcgacctttccggtgcgccagatgcgcacctataccgacgatagcggcacggtgcgc
tcggaaccgatgatcgacgaggccgggcagccggtgctgtgccgggaagcgatcgccatg
cgcgaccagctcctcgagcaactctgtgcgctgccggtggtcggctcggcgctcgatcat
atcatcgggcatttcgggacggaggcagtggccgaggtgacgggtcgcagccggcggatc
atcgtcgatgccgagggccgtcagcggatcgaacggcgcagcgcgcgcacgaacctcgcg
gagaccgacagcttcatgcgcggcgaaaagcgcattctgatcttttccgacgccggcggc
acgggacggagctatcatgccagcctcgacgcgctcaatcagaggcgccgcattcactat
ctcctcgagcccggttggcgtgctgacgcggcgatccaggggctaggccgcacgcaccgc
acccaccaagccagtccacccctgtttcggcccgtttccaccgattgccgcggcgaacgg
cggttcatctcgacgattgccagacgcctcgacagcctcggcgcgctgacccgcggccag
cgccagaccggtggacagggacttttcgatccccgtgacaatctggagtccgacttcgcg
cgggaatcgctcgaccagtggtttcgcctgttgttccagggaaagctccaatcggtgcgc
ttcgatcagtttcaaacgctcaccgggctgaatctggcgggcgagggtggggggctcacc
gagaccttgcccacgatccagcggtggttgaaccgcatcctggcgctgcgtatcgacctg
cagaacgcgatcttcgacgaatatctgggcttgatcgaagcacgggtggaaaaggcccgc
gaggccggcaccctcgatcttggcgtcgagacgatcgcggccgaccgtatttcgatcctc
gaccgcacggtgatccggcgcgatcccgtgagcggcgccgaaaccgaaatcctgcgcatc
gaaaccgaggaacgatatcggccgctgcccctggaacgagcgcattggcttctggccgac
ccggaagcgcgccgattgatcaacccgcgttccggcaaggccgccatttgccgacccacg
ttctcgctgacggacgaagagggacggaccgtgcgccgctacgagctggtgcggccgacg
cgcaccgaacggcaccggcaggacctcttcgccgaaacacattggaccgacgtggatcgc
gcgagcttcgacgaagcctggcaggctgaatgcgacgcaatggcggcgcagacacgcacg
cagatcatctatctggtcaccggcctgctgctcccggtctggggaaaactgcccgacgat
catgtccaggtctggcggctgacgagcgatgacggccagtcgcttctcgggcgccttatt
ccggcgccgcttgtggaacgcatcgcgggcgcgttcggcatcgcggcccatgtcgagatc
gaccttaatgctcgggtcgagcatgtccgcacctcgggtgaaatcatgccgatcggagcg
ctgcggctgaagcgcgccttggtcgctggcgaccaacgcctcgaattgctcgactggaag
cccgaggcgctgccgcatctcaaggcggtgggctgcttcactgagatcatccagcaccgc
acgcggctgttcgttccctcgagccgcgccgtcgagatcctggacggactcgcaggctga
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