KEGG   Sphingobium baderi: ATN00_21560
Entry
ATN00_21560       CDS       T04194                                 
Name
(GenBank) type VI secretion protein
  KO
K03200  type IV secretion system protein VirB5
Organism
sbd  Sphingobium baderi
Pathway
sbd03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    ATN00_21560
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sbd02044]
    ATN00_21560
Secretion system [BR:sbd02044]
 Type IV secretion system
  Conjugal DNA-protein transfer (VirB/D) protein
   ATN00_21560
SSDB
Motif
Pfam: T4SS
Other DBs
NCBI-ProteinID: ALR23080
UniProt: A0A0S3F6E7
LinkDB
Position
pDE2:complement(57942..58664)
AA seq 240 aa
MSLKHIIMFAAAPLALAATAAPASAQGIPVFDSTGYIQALATVQNTIKMIEQGEQQISTA
TNTLNSLQKLTNVNSIASSLFNSQTRNLLPNTTIDAQTLLGGDLTKIGSLGSLASSIQSR
YTISSSGSDADTAYNQALKDATGSAAATAAFGENTLNVTQQRMQLLDQLREQLSSAKDPK
DVMDLNARISVEQAQLQNDMLKLQAIQTAQFGHANLAIATAQTSAARNAASFYDANTLRK
NT seq 723 nt   +upstreamnt  +downstreamnt
atgtcgctcaagcacatcatcatgttcgcagcggcgcccttggcgctcgctgcgaccgcc
gccccggcctcggcgcagggtatcccggttttcgattccacgggctacatacaagccctc
gcgaccgttcagaacacgatcaagatgatcgaacagggcgagcagcaaatctcgaccgcc
accaacacgctcaactcgctgcaaaagctgacgaacgtgaacagcatcgcatcgagtctc
ttcaattctcagacgcgcaacctcctgccaaacacgaccatcgacgcacaaacgctgtta
ggcggcgatctgaccaagatcggctcgctgggctcgctcgccagcagcatccagtcccgc
tacacgatttcgtcctccgggtcggacgcggacaccgcctacaaccaggcgctcaaggat
gcgaccggctctgccgctgctacggccgccttcggcgagaacacgttgaacgtgacgcag
cagcggatgcagctcctcgatcagctccgcgagcaactgtcgagcgccaaagaccccaag
gacgtgatggacctgaacgcccgtatctcggtcgagcaggcgcagctccagaacgacatg
ctgaagttgcaggcgatccagacggctcagtttggacacgcgaaccttgcgatcgcgacg
gcgcaaacctcggctgcccgcaatgcggcctcattctacgacgccaacactctcaggaag
taa

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