Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0045
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Entry
RAAC3_TM7C01G0045 CDS
T02942
Name
(GenBank) Exodeoxyribonuclease I
KO
K01141
exodeoxyribonuclease I [EC:
3.1.11.1
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
RAAC3_TM7C01G0045
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbe03400
]
RAAC3_TM7C01G0045
Enzymes [BR:
sbe01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.1 exodeoxyribonuclease I
RAAC3_TM7C01G0045
DNA repair and recombination proteins [BR:
sbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
RAAC3_TM7C01G0045
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
RAAC3_TM7C01G0045
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
RAAC3_TM7C01G0045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_X-T_C
RNase_T
Motif
Other DBs
NCBI-ProteinID:
AHB41918
UniProt:
V5RU66
LinkDB
All DBs
Position
complement(36298..37734)
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AA seq
478 aa
AA seq
DB search
MQTFYFYDLETSGLSGRDDRIMQFAGIRTDRELNPIGEPHNVLVRLNDDTLPSPDAIMVT
GITPQDTQRDGLTEAEFAKFLMSDVFTEESVTVGFNNVRFDDEFIRHLLWRNFHDPYEWA
WSNGRSRWDILDVVRMTRALRPEGIEWPVDNDGQPTNRLELISKVNGIEHTKAHDALSDV
EALIAVAKLIRDNQRKLFDYLFTMRDKKAVQKLVNLDEKQPFVYTSGRYETAYNKTTVAF
PLTAAPNGNVVVYDLRHDPTPFIDLSVDELKKRLFATWEQRKADDFVPVPLKVLQYNRTP
AVAPLGVLEEAGGWQKISLDIETVEAHKKILLSRPDFAEKLRSLYEKSRDYPPSPDVEAQ
LYDGFIDGSDKVRIEAVRNASPEQLADFQPNFSDERLSPLLLHYKARSFPGVLSEDEVKQ
WEAWRASRLQAQLPRFASSLQRLAAATTDDKKQFLLQELQLWAEAILPADDDTTDSSE
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacattctatttctacgatctagagacgagcgggctgagcggacgtgacgaccgt
atcatgcaatttgccggcattcgtacggatagagaactgaaccctatcggcgagccgcac
aatgtactggtgagactaaatgacgacaccttgccgagtccagatgccatcatggtgacg
ggtattacaccgcaagatacgcagcgcgatggcctgacagaagccgagtttgccaagttc
ttgatgagcgacgtatttactgaagagtcggtgacggtcgggttcaataatgtccgtttt
gacgatgaatttatccgccatctattatggcgtaatttccacgacccgtacgagtgggca
tggtcaaacggccgatcacgttgggacatactagacgtggtgcgtatgacgcgagcactt
cggccggagggcatcgagtggcctgtcgataacgacggtcagccaactaatcgcctggaa
ttgatcagtaaggtgaatggcatcgagcatacgaaagcccatgacgctttatcggatgtt
gaagcgctcatcgcggtggcaaagctgatccgcgacaaccagcgaaaactctttgattat
ctttttaccatgcgcgacaaaaaggcggtgcaaaagctggtcaacctcgacgaaaaacag
ccgttcgtctataccagcggccgctatgagaccgcctataacaaaacgacagtagctttt
ccgttgacagcggcaccgaatggtaatgtcgtcgtttatgatctgcggcatgacccgacg
ccgttcattgatctctcggtagatgagttgaagaaacggctttttgcaacatgggaacaa
aggaaggcagatgacttcgtgccagtgccgcttaaggtattgcagtacaaccgcactcca
gcagttgctccattaggagtgctcgaggaggctggaggctggcaaaagattagtcttgat
attgagacagttgaagcgcacaagaaaattcttctctcgcggccggactttgccgaaaag
ttgcgcagcttgtacgaaaaatcacgtgattatccgccaagtcccgacgttgaggcgcag
ctttatgatggctttattgatggctccgacaaagtacgtatcgaagccgtacgcaatgct
tcgcctgagcagctggctgacttccagccgaactttagcgatgaacggctcagtccgctg
ctgcttcactacaaagcacgcagctttcccggtgtgctcagtgaagatgaggtcaagcag
tgggaagcctggcgtgccagtcgcttgcaggcacagctaccgcgttttgcctcgtccttg
cagcgattggccgcggcgacaacagacgataaaaaacagtttcttctacaagagctgcaa
ctatgggcggaggcgattttgccggctgacgacgacactaccgacagttcggagtaa
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