Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0066
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Entry
RAAC3_TM7C01G0066 CDS
T02942
Name
(GenBank) ATP-dependent DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03420
Nucleotide excision repair
sbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAAC3_TM7C01G0066
03430 Mismatch repair
RAAC3_TM7C01G0066
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbe03400
]
RAAC3_TM7C01G0066
Enzymes [BR:
sbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAAC3_TM7C01G0066
DNA repair and recombination proteins [BR:
sbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAAC3_TM7C01G0066
MMR (mismatch excision repair)
Other MMR factors
RAAC3_TM7C01G0066
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AHB41939
UniProt:
V5RWF5
LinkDB
All DBs
Position
complement(57825..60026)
Genome browser
AA seq
733 aa
AA seq
DB search
MNILEGLNEAQASAVTSGDGPLLILAGAGSGKTKTLTHRIAYLIAEKGIWPEQILAVTFT
NKAAREMRERLWKLLSEAPPKRKPAESTSAPSELQREGASMEFISRGAGGQSPPRSFMPW
MGTFHGICVRLLRIDGHLIGIQSNFVIYDQDDRQGLVKQAMKDCGVTDKKIKPRVVSDII
SSAKNEMVDPDEFEATANYPFQKTVASVYRRYEQLRKEAGALDFDDLLLETVRLFREVPD
ARKKWRSKFTHIMIDEYQDTNAAQYTIVKSLVGSERNICVVGDDWQSIYSWRGADFTNIL
NFERDFPGARIIKLEQNYRSSGAILEAAHNVITKNTRRTDKKLWTAEGMGTPVQVHELYD
EAEEARLVASRISAQAAIKARTPGDFAVLYRTNAQSYILERAFLQARVPYQIVGGVRFYD
RKEIKDVIAYLRLLYQPQDRMSFSRIANVPTRGLGASSLERFMIWQAGSGLDIVTALSRV
QEIDGLTPRAKNSFIRLADILQSIDMASEPSAIIEQILERSGYLEYLRDGSPQAEEREGN
ISSLVSDAKTFAALPDFLEEVALMSSVDESSSEEKVTLMTLHAAKGLEFPVVFMVGMEEG
IFPHARVHEAGPSELEEERRLCYVGMTRAREELHLSYAASRLQFGERGYNAPSRFLKDMG
NGVSLQAAGADRVSHDEPAYYDEIPELDINDRVRSAQFGDGIIVDVDGLAVTVQFDQGQR
KKLNVEYARLQRL
NT seq
2202 nt
NT seq
+upstream
nt +downstream
nt
atgaatatacttgaggggttgaacgaggctcaagcgagcgccgtgacgtccggtgacggg
ccgctcttgattttggcgggcgcgggcagcggtaagacgaagacgctgacgcatcggatt
gcgtatctaattgctgaaaaaggtatctggccagagcaaatcctggcggtgacctttacc
aataaagccgcgcgtgaaatgcgcgagcgcctttggaaactgttaagcgaagcgccgcca
aagcggaagccagctgaaagcacgagcgccccaagcgagcttcagcgggagggagcttct
atggaattcatttccagaggagctggagggcagagccctcctcgatcatttatgccctgg
atggggacgttccatggcatatgtgtgcgcctgcttcgaatcgacggtcatctgatcggt
attcagagtaatttcgtgatctacgatcaggacgaccgacagggactcgtcaagcaggca
atgaaagattgtggggtgacagacaagaagattaaaccccgtgtcgttagcgatatcatc
tccagcgccaaaaacgagatggttgatcccgatgaatttgaagccactgctaactaccca
ttccaaaaaacagtcgccagtgtctatcgacgctatgaacagctacgaaaagaagccggt
gcgctggactttgacgatctgttgcttgaaacggtacggctttttcgcgaagtgccggat
gcgcgtaaaaaatggcgcagtaaatttactcatatcatgatcgacgagtaccaggataca
aacgccgcacagtacacgatcgtcaaaagtttagttgggtcggaacgaaacatctgtgtt
gtcggcgatgactggcagagtatttatagttggcgcggagccgactttaccaacattctc
aattttgaacgtgattttccaggtgcgcgtatcatcaaattagagcagaactatcgcagt
agtggagcaattctcgaggcagcacacaatgtgattactaagaacacccggcgtaccgac
aagaagctatggactgccgaaggcatgggcacaccggtgcaggttcatgaactctacgat
gaagccgaagaggctcggctcgtcgctagccgtatcagtgcgcaggcggcgataaaggca
cgaacgccgggcgatttcgcggtgttataccgcaccaacgcccagagctatatcttggag
cgggcatttttgcaggcacgagtcccgtaccaaatcgtcggcggtgtgcgcttttacgac
cgcaaagagataaaagacgttatcgcctacttacgtctcctctatcaaccgcaagatcgc
atgagttttagccgcatcgccaatgttccgacgcgggggcttggcgccagtagtctggag
cgttttatgatctggcaagcgggcagtggccttgatattgtcacggcacttagccgcgtg
caagaaatcgatgggttaacaccgcgagcaaaaaactccttcatcagactcgcagatatc
ttgcagagtatcgacatggccagtgaaccaagtgctattatcgagcaaatcctggagcga
agtggctacttggagtatctccgtgatggttcgccgcaagccgaagagcgagagggcaac
atcagctcactggtgtcagacgccaagacgtttgcagcgctaccggatttcctggaagaa
gtggccttgatgtcgagcgtcgatgagagcagcagtgaagaaaaagtaacccttatgacg
ctgcatgccgccaaagggctcgagtttccggttgttttcatggtcggtatggaagaagga
atcttcccacatgcacgcgtccacgaggccggaccaagcgaacttgaagaagaacgtcgt
ctctgttacgtgggcatgacccgagcgcgtgaagagctgcacctgagctatgcagccagc
cgcctacagtttggcgaacgcggttataacgcgccatcacgctttctaaaagatatgggt
aatggcgtgagcctgcaggccgctggggctgaccgagtatcccacgatgaaccggcttac
tatgatgaaataccggaactcgacattaatgaccgagttcgttccgcccagtttggtgat
gggataatcgtggacgtggatggcctggccgtaacggtgcagtttgaccaaggtcagcgt
aaaaagctcaacgttgagtatgcccgcctgcagcgcttatga
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