Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0354
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Entry
RAAC3_TM7C01G0354 CDS
T02942
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAAC3_TM7C01G0354
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbe03019
]
RAAC3_TM7C01G0354
03110 Chaperones and folding catalysts [BR:
sbe03110
]
RAAC3_TM7C01G0354
03029 Mitochondrial biogenesis [BR:
sbe03029
]
RAAC3_TM7C01G0354
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbe04147
]
RAAC3_TM7C01G0354
Enzymes [BR:
sbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
RAAC3_TM7C01G0354
Messenger RNA biogenesis [BR:
sbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
RAAC3_TM7C01G0354
Chaperones and folding catalysts [BR:
sbe03110
]
Heat shock proteins
HSP60 / Chaperonin
RAAC3_TM7C01G0354
Mitochondrial biogenesis [BR:
sbe03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
RAAC3_TM7C01G0354
Exosome [BR:
sbe04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
RAAC3_TM7C01G0354
Exosomal proteins of other body fluids (saliva and urine)
RAAC3_TM7C01G0354
Exosomal proteins of breast cancer cells
RAAC3_TM7C01G0354
Exosomal proteins of colorectal cancer cells
RAAC3_TM7C01G0354
Exosomal proteins of bladder cancer cells
RAAC3_TM7C01G0354
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
AHB42211
LinkDB
All DBs
Position
317739..319409
Genome browser
AA seq
556 aa
AA seq
DB search
MAKKVFYDEEARERVLGGAKALYDAVKVTYGPKGRNVVIAKGYGGPTVTHDGVTVAEGME
LPENDDETLGYKVGADLIKQAAKNLNKSAGDGTTTVTVLTYNILKEANRLIAAGHNPMEL
RKGIEAAGAEVVKALDGMSESIEGNTERVAEVATISAGDAQIGTLIADVIEKIGKDGVVT
VEAGQGLEMEAEVVEGFSLDKGWASPFFVTDTNRQEAVFEKPSIVITDKKISSASELLPL
IEKLAQAGKKDIVLVADDVDGEALSILVLNKLKGVLNTVVVKAPSFGDRRKEIMADMAVL
TGAQVISEDQGMTFENVGLEVVGLARKVIVGKDETTIIEGVGHADEIAARIKQISAQAEN
ASSEYDKEQYEKRAAALSGKVAVIKVGGATETEIDEKKFRVDDAVAATKAALAEGIVPGG
GVTLVNLAKKLEVVNQSNKGIPSGNLTYFAGHQVVREALKQPFLQITANAGLNSEALLAQ
VEDAKPGMGVDVMNPGKTLIDVKKAGVIDPTRVTKEAVQNAVSIASTAATMGALVVDIPE
KEASMPPMGGGMPGMM
NT seq
1671 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaagttttttatgatgaagaggcccgcgagcgcgtactcggcggggcaaaa
gcactctatgatgccgttaaggtaacctacgggccgaaaggtcgcaacgtggtgattgcg
aaaggctacggcggcccaacggtcactcacgacggcgtgactgttgctgaaggtatggaa
ctaccagagaatgatgatgagacgctcggctacaaagtcggtgccgatctcatcaagcag
gcagccaagaatctcaacaaaagcgccggtgatggtacgactaccgttaccgtgctgact
tacaatatcttgaaagaagcgaaccgtttgatcgcggctggccacaacccgatggagcta
cgcaagggtattgaagctgccggggcagaagtagtcaaagcactcgatggtatgagtgaa
agtatcgaaggtaacaccgaacgtgtggccgaagttgcgaccatttcggctggtgatgcc
cagatcggtacattgattgctgatgtgatcgaaaagatcggcaaagatggtgtggtcacc
gttgaagccggccagggtctcgagatggaagccgaagtcgtcgaaggttttagtctcgac
aaggggtgggcgagcccattctttgtgaccgacaccaatcgccaagaagcagtctttgaa
aagccgtcgattgtcattaccgataagaagatctcaagtgccagtgaactgctgcccctg
atcgagaagcttgctcaagctggtaaaaaagatatcgtgttggtagccgatgatgttgac
ggcgaagcgctcagtatcttagtactcaacaagcttaaaggcgtcctcaacactgtcgtt
gtcaaagcaccgagctttggtgatcgccgcaaggaaatcatggccgatatggccgtcctg
actggtgcacaggtaatctctgaagaccaaggtatgacgtttgaaaacgtcggccttgaa
gtcgtcggtttggctcgtaaagttattgtcggtaaagacgagaccaccatcattgaaggg
gtcggccacgctgatgaaatcgcggctcgcatcaaacagattagcgcgcaagccgaaaac
gcttcgagcgaatacgacaaagagcaatacgaaaaacgtgcggcggcactttctggtaaa
gtcgccgtcattaaagtcggtggcgccacagagacggagattgatgaaaagaaattccgt
gtcgatgatgccgtggcggctacaaaagcagcgctggctgaaggtatcgtgccgggcggt
ggtgtcaccttagtgaaccttgctaagaaattggaagtagtcaaccagtcgaataagggt
attccaagtggtaatctaacctactttgctggtcaccaggttgtcagagaagctctcaaa
caacccttcttgcagattaccgcaaacgctgggcttaacagcgaagcattgctggctcaa
gtcgaagatgcaaaacccggcatgggagttgatgtcatgaatcccggcaagacacttatt
gatgtcaaaaaagccggtgtcatcgacccgactcgcgtcaccaaagaagctgtccaaaac
gcggtctcgatcgcttcgactgcagccactatgggcgcattggtagtagacatcccggaa
aaagaagcctcaatgcctccaatgggcggcggtatgcctgggatgatgtag
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