Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0411
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Entry
RAAC3_TM7C01G0411 CDS
T02942
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbe03016
]
RAAC3_TM7C01G0411
Enzymes [BR:
sbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RAAC3_TM7C01G0411
Transfer RNA biogenesis [BR:
sbe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RAAC3_TM7C01G0411
Prokaryotic type
RAAC3_TM7C01G0411
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AHB42268
LinkDB
All DBs
Position
372792..373481
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AA seq
229 aa
AA seq
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MQFDLSKAKDGVLLVDKPAGWTSFDVCAKIRGQIRAEYQQQGIKPTKRQLRVGHAGTLDP
FATGLLIVLLGDATKKADEFLKLDKVYEATIRLGQVSTTGDPEGDLTNVSDRQPTREEIE
QVLTQFTGDIEQRPPVFSAIKIDGKRAYKLARNGEMIEMPLRKVTIYSLELLGYSYPELK
IRTHVSSGTYIRSLAVDSGEVLGTGAYCSELRRVKIANYSVKEASLPSG
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
gtgcagtttgatctctcgaaagccaaagacggtgttctactcgtcgataagccagccggt
tggacgagttttgacgtttgtgcaaaaatccgcggacagatacgcgccgaataccagcag
cagggtatcaagccaactaaacgccagctaagagttggtcatgccggcacgctcgatccg
tttgcgacagggctgttaattgtgctgctcggtgacgccacaaaaaaggcagatgagttc
ctgaaacttgataaagtctatgaggctactattcgacttggacaggtgagcacgaccggt
gatccggaaggggatctgacaaatgtttccgaccgccaaccgacgcgtgaggaaatcgaa
caagtacttacacagtttaccggtgacatcgagcagcgaccaccagtctttagcgcgatc
aaaatcgatggaaaacgtgcctataagctagcgcgaaacggagaaatgatcgagatgcca
ctcaggaaagtgacgatctactcactagagctcctcggctactcatatcctgagctaaaa
attcgcacgcatgtcagcagcggtacatatattcgaagccttgcggtggatagtggagaa
gtattaggaactggggcgtactgtagcgaactacgccgtgtgaagatagcaaattatagt
gtcaaagaagcgagtctaccttctgggtaa
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