Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0415
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Entry
RAAC3_TM7C01G0415 CDS
T02942
Name
(GenBank) hypothetical protein
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RAAC3_TM7C01G0415
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbe03019
]
RAAC3_TM7C01G0415
03016 Transfer RNA biogenesis [BR:
sbe03016
]
RAAC3_TM7C01G0415
Enzymes [BR:
sbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
RAAC3_TM7C01G0415
Messenger RNA biogenesis [BR:
sbe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RAAC3_TM7C01G0415
Transfer RNA biogenesis [BR:
sbe03016
]
Prokaryotic type
tRNA degradation factors
RAAC3_TM7C01G0415
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
S1
RNase_PH_C
KH_1
PNPase
S1_RRP5
KH_2
OB_RRP5_4th
KH-I_KHDC4-BBP
KH_KhpA-B
BPL_C
PCB_OB
Motif
Other DBs
NCBI-ProteinID:
AHB42272
UniProt:
V5RVJ3
LinkDB
All DBs
Position
375152..377263
Genome browser
AA seq
703 aa
AA seq
DB search
MSTINPNGKEIISVSADVCGKPLTLEVNRVGFRTTASVLVKYGDTIVLGTTQIGSRPIQL
DYFPLSVDYEEKMYAAGKISGSRFIKREGRPSDEAVLIGRIIDRPIRPLFPKGYRAEVQV
VASVLSMDPTFRPDMVAMIAASAALSISGAPFDGPVAGLRVGRVNGEFKAFLTPEEREAS
DLDLVVAGIESGVVMVEAGANQVDEEVIIDAITWAHGAMQPAIALQKELAEKIATAPIDY
ELVLPNEAIQAEVDEWTHEKLGEKLQRPYPERNEMINELRWKFHEDMAKKVGDTYDEQRD
EYDEAFTMALHKDVRRGIVEEQTRPDGRKLDEIRPLSSEVGILPRTHGSSLFTRGVTQGM
NIITLAPLSYAQMVDTMEVTDGERRYMHHYNAPGYTVGEVRRLGSPGRREIGHGYLAERA
VLPVLPTEEEFPYAIRSVTEIMSQNGSTSMAATCSSVLALMDAGVPLKAPVSGIAMGLMM
DGEKPYVLSDIADAEDFAGDMDFKVTGTEHGITAVQMDMKLHGLPVSVLAEAIRGSTAGR
KHILEHMLTTLAAPRTSLSPYAPRIEKIKINPEKIGAVIGKGGEVINKITSETGAEIDIK
DDGLITVASANADSIKKALDWIKSLTEEPEVGRIYEGTVVSIKDFGAFVNIMPGTDGMVH
ISQLSDKRVEKVTDVLHEGQVVKVKLTGIDERGRLSLSLKDAE
NT seq
2112 nt
NT seq
+upstream
nt +downstream
nt
atgtctacaataaaccctaatggcaaggaaattatttccgtttctgccgatgtgtgcggc
aagccgctcacactcgaagttaatcgcgtcggctttcgtacaaccgctagtgtgctggta
aagtacggcgacaccatcgtgcttggcaccacacagatcggcagccggccgattcagctc
gactatttcccactgagtgtcgactatgaagaaaaaatgtatgcagctgggaaaataagc
ggcagccgctttatcaagcgcgaaggccgtcctagtgacgaggcagtcttaatcggtcgt
attatcgaccgtccgatccgcccgctttttccaaaaggctatcgcgccgaagtacaagta
gttgccagtgtgctttcgatggacccaacgttccgccccgatatggttgccatgattgcc
gccagtgccgcactaagcatcagtggcgcgccgtttgacggtccggtagcggggttacgg
gttggtcgtgtaaacggcgaatttaaggctttcttgacccccgaagagcgggaggcatct
gatcttgatcttgtcgtcgccggtatcgaaagtggcgtcgtcatggtagaagctggtgct
aaccaagtcgatgaagaagttattatcgacgcgatcacgtgggcacatggcgccatgcag
ccggcaattgcactgcagaaggaactggctgagaagatcgctaccgcaccaatcgactat
gagttggtcttacctaacgaagctattcaggccgaagttgacgagtggacacacgaaaaa
cttggcgaaaagctccagcgaccctacccagaacgcaatgaaatgatcaatgaacttcgt
tggaagtttcatgaagatatggctaaaaaagtcggtgatacatacgatgagcagcgcgat
gaatacgatgaagcctttacgatggcgcttcataaagacgtccgccgcggtatcgtggaa
gagcaaacccgtcctgacggccgtaagctcgatgaaatccgcccgctcagctctgaagtt
ggcatcctaccgcgcacgcacggctcgagcctgtttacgcgcggcgtcactcagggcatg
aatattatcacgctggcaccactgagctacgcacagatggttgacactatggaagttact
gatggcgaacgtcggtacatgcaccactacaatgcgccaggctatacggtcggcgaagtt
cgtcgcctcggctcgccgggacgtcgtgagattggtcatggctacctagctgaacgtgcc
gttttgccggtgctaccaaccgaagaggaattcccgtacgcgattcgcagcgtcactgaa
attatgagccaaaacggttcaacctctatggccgctacctgctcaagtgttctcgcgctg
atggacgccggagtaccactgaaagcgcctgtttcgggtattgctatgggtctgatgatg
gatggcgaaaagccgtacgtactgtctgatattgccgatgccgaagattttgctggtgat
atggactttaaggtgaccggtaccgagcacggtattacggctgtccagatggatatgaag
ttgcacggcttgcctgtctctgtcctcgcagaagcaattcgtggttcgactgcaggtcgc
aagcacatcttagagcatatgctgacgactctggcggcgcctcgcaccagcctcagcccg
tatgcgccacgcatcgagaagatcaagatcaatcctgagaagatcggggcagtgattggc
aagggcggtgaagtcatcaataagattacgtctgaaaccggcgccgagatcgacataaag
gatgacggcctcatcacggtagccagcgccaatgctgactcgatcaagaaagcacttgat
tggatcaagagcctgactgaagagcctgaagttggtcgtatttacgaaggaaccgttgtg
tcgatcaaagactttggcgccttcgtgaatattatgccgggtaccgacggtatggtgcat
atttcgcagttgagtgacaagcgtgttgaaaaagtcaccgatgtcctgcacgaaggacag
gtcgtcaaggtaaaactaaccggtatcgatgaacgcggtcgccttagcctcagtcttaaa
gacgcggagtag
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integrated database retrieval system
