Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0648
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Entry
RAAC3_TM7C01G0648 CDS
T02942
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sbe03009
]
RAAC3_TM7C01G0648
Enzymes [BR:
sbe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
RAAC3_TM7C01G0648
Ribosome biogenesis [BR:
sbe03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
RAAC3_TM7C01G0648
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AHB42492
LinkDB
All DBs
Position
complement(577438..578139)
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AA seq
233 aa
AA seq
DB search
MDETTRLNKYLALRLGIARREADELIEQDKVTVNQLTARLGTRVKADDEVRVDGKLLATP
RQLEYLLLHKPVGYVCSRRAQGETPTIYELIPEKYHHLKPVGRLDKDSSGILLLTNDGDF
AFTMTHPQFQKVKVYEVTLDHALAPLHQQMISDFGVMLPDGKSQLELERLTDSRLDWRIT
MKEGRNRQIRRTFGALGYTVTMLHRTHFGRYQLGDLASGEFRLLEDTPASTQR
NT seq
702 nt
NT seq
+upstream
nt +downstream
nt
atggatgaaacaacccgcctaaataaatatctggcgcttcggctcggcattgctcgccgt
gaagctgacgaactcatcgagcaggataaagtaaccgtcaatcagctgacggctaggctt
ggtacgcgtgtaaaagccgatgacgaggtacgtgtcgacggcaaactgcttgctactcct
cgtcagcttgagtacctactacttcataagcccgttggctacgtctgctcgcgccgcgct
cagggtgagacaccgacaatctatgagcttattcctgagaagtatcatcacttaaaaccg
gtcggacgacttgacaaagatagttccgggatcttgctcctgacaaatgacggtgacttc
gcttttacaatgactcatccccaattccaaaaggtaaaagtctatgaagtaaccctcgac
catgcactagcgccgcttcaccagcaaatgatcagcgactttggcgttatgctacccgac
ggtaaaagccagcttgagctcgagcggctcaccgatagccgacttgattggcgtatcacg
atgaaagagggtcgtaaccgtcagattcgccggacatttggcgcactcggctataccgtc
actatgcttcatcgcacccattttgggcgttatcagctcggcgacctcgcctcaggtgag
tttcgtctccttgaggataccccagcttctacgcagcgctga
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