Candidatus Saccharibacteria bacterium RAAC3_TM7_1: RAAC3_TM7C01G0693
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Entry
RAAC3_TM7C01G0693 CDS
T02942
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbe
Candidatus Saccharibacteria bacterium RAAC3_TM7_1
Pathway
sbe03420
Nucleotide excision repair
sbe03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
RAAC3_TM7C01G0693
03430 Mismatch repair
RAAC3_TM7C01G0693
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbe03400
]
RAAC3_TM7C01G0693
Enzymes [BR:
sbe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
RAAC3_TM7C01G0693
DNA repair and recombination proteins [BR:
sbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RAAC3_TM7C01G0693
MMR (mismatch excision repair)
Other MMR factors
RAAC3_TM7C01G0693
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_30
NNH1
Dna2
DEAD
Motif
Other DBs
NCBI-ProteinID:
AHB42535
UniProt:
V5RX51
LinkDB
All DBs
Position
complement(616380..619730)
Genome browser
AA seq
1116 aa
AA seq
DB search
MSTKHHYKTVLNTHDDRLRYNSNSMDFATRYKKLNARQKEAVDTIEGPLMVVAGPGTGKT
ELLSMRAANILRKTDTLPENILCLTFTESGAAAMRQRLGEIIGPAAYKVAIHTFHSFGSE
IINQYGEYFYQGAAFRPADELSSYELLYSIFDSLEYSNPLASKMNGDYTHLRDTLGTISD
LKKSGLTSDELLAVLDANEHTLDRIEPDVAAIFADRISKATIDKLANVAQRIANEKPPKL
PPGITPLSDVFARSLAHAVKNAIDADSTKPITAWKNTYLEKNERGEFVFKDRRRIAKLRA
VSFIYYQYLMKMQEMELYDFDDMVLNVVHTMEVNSSLRFDLQERYLYIMVDEFQDTNMAQ
ARILYNLTANPTGDEPNIMVVGDDDQAIYSFQGAEVGNILSFRDRYESVKLVTLADNYRS
ADLILEKARSVITLGEQRLERFVEEIDKTLVAHHAPKHANVQLREYERPEDERRALAASI
KQQLDEGTDGANIAVLARRHHELTNLIPYFYALDIPVNYERRDNVLEADVIQQLLTLTRV
VTLTAASRIDEADALLPELLAHPAWGIDAEAIWSLSLAAYKHRSSWREELAIAPAWKPFH
DWLAERVRDSLTLPLETVLDELIGLPDESEGRQAFHSPLYGHFFSDERRAHNPEQYLVYL
EAVRTIRTKLREYKPMETLKLSDFIEFVELHQRIGSVISSVRVRSDAPSGAINLMTAHKA
KGLEFDHVYIYGAVDSAWGERVRVRSRLIGYPENLPIGVAGDSFDERLRLFFVAMTRARS
TLTISYSLSDTSDKPTLRASFLNSDGWEVSSPEVEQTVAATIESLEREWRQPLLALSKTS
MKELLTPLLTDYKLSATHLNNFIDVTRGGPQHFLLNNLLHFPQAISPNAAYGSALHQALH
RAHSHRRATHKAKPIEDILHDFQSELSSMHLAAHEYEQFLRRGEDALETFLGECYETFTD
TQLSEQNFNSQQSFCGSAHLTGKLDLVDIDETTKTIVVTDYKTGKPSSAWRGKTDYEKIK
LHKYRQQLMFYKLLIENSRSYHNYEVREGRIQFVEPTPDGTIYRLDLTFDQKELDRFARL
VEAIYGKITALDLPDSTAYAATYQGILDFEDSLLVE
NT seq
3351 nt
NT seq
+upstream
nt +downstream
nt
ttgtctacgaaacaccactataagacggttttgaacacccacgatgacaggttgcggtac
aatagtaacagtatggattttgcaactcgctacaaaaagttaaatgctcgccagaaagaa
gccgtcgacacaatcgaaggcccactgatggtcgtggccggaccagggacgggcaagacc
gagctactgagtatgcgtgcagccaacattctccgtaaaactgacacgcttccagaaaat
atcctctgtcttacctttaccgaaagtggtgcagcggcgatgcgccagcgactcggcgag
atcatcggcccagccgcctacaaagtcgctatccataccttccacagttttggcagcgag
atcatcaaccaatacggtgaatacttttaccaaggcgctgcttttcgacccgccgacgaa
ctgagctcgtacgaactgctatattcgatcttcgattcgctcgaatacagtaaccctctg
gccagtaaaatgaacggtgactacacacaccttcgcgatacgctcggcacgatttccgat
ctaaaaaagagcggccttacgagtgacgagctgctcgccgtactcgatgccaatgagcat
acgctcgatagaattgaaccggacgtcgcggccatttttgccgatcgtatctccaaagct
acaattgataaattagcaaatgtcgctcaaagaatagctaatgaaaaaccgccaaagtta
ccgcctggtatcactccactctctgacgtcttcgcgcgtagtcttgcgcatgccgttaaa
aatgcgatagacgccgactctacaaagcccattactgcctggaaaaatacttacttagag
aagaatgagcgtggcgaatttgtctttaaggaccgtcgtcgcattgcaaaactacgtgcg
gtaagttttatctattaccagtatctgatgaagatgcaggaaatggagttatatgatttt
gacgacatggtacttaatgttgtgcatactatggaggttaacagtagcctcagatttgac
ctccaggaacgctatctctacattatggttgacgaatttcaggataccaacatggcgcag
gcgcgtatactctataacctcactgccaacccgacgggcgacgaaccgaatatcatggtt
gtgggtgatgacgatcaggcaatttacagcttccagggtgcagaagtcggcaacattctc
tcgtttcgcgaccgctatgagtcggtaaagctggtcacgctagccgataattaccgttcg
gcagacctcatcctcgagaaagcccgtagtgttattacgcttggtgagcagcgtctggag
cgtttcgtcgaggagatcgataaaactctcgtcgctcatcacgcgccgaagcatgccaac
gtccagctccgtgaatatgaacgccccgaagatgagcggcgtgccctcgccgcgtccatc
aaacaacagctcgacgagggcaccgatggcgcgaatattgccgtgctggcacggcggcat
catgagctgaccaacctcatcccttatttttatgccctcgatattccggtcaattatgag
cgtcgcgacaacgtcctagaagccgatgttatccagcaacttctcactttgacgcgcgtc
gtcacactgacggcagccagccgaatcgatgaggcagacgcgctcttgccggagctcttg
gcgcatcccgcatggggaattgatgccgaagctatctggagtctcagcctcgctgcgtac
aagcaccgcagtagttggcgagaagagctcgccatagcgcccgcctggaaaccatttcac
gactggctcgccgagcgcgtccgcgacagtctcacactgccgcttgaaacagtactcgat
gagttgatcggattaccagatgagagtgaaggccgccaagcgttccattcaccgctgtat
ggtcacttctttagcgatgagcggcgagcgcataatcccgaacagtacctggtctatctc
gaagcggttcggacaatccgcacaaaactccgcgaatacaaaccgatggagacgctaaaa
ctcagtgattttattgaattcgtcgagcttcaccagcgaattggtagcgtgatcagtagc
gtccgcgtccgcagtgatgcgccaagtggcgctatcaacctaatgaccgctcacaaggcc
aaagggctagagtttgaccacgtttatatctatggcgcagtcgattcagcctggggcgag
cgtgtccgtgtgcgtagccgcctgattggctacccggaaaatctaccaatcggggtagcg
ggcgatagtttcgatgaacgtctccgactgttctttgtcgctatgactcgcgctcgcagt
accctgacgattagctacagcctgagcgatacgagtgacaagccaactttgcgcgccagc
ttcctcaatagcgacggttgggaagttagctcccccgaggtagagcagactgtcgctgca
acgatcgaaagcttagagcgcgagtggcgccagccactactggcactctccaaaacatcc
atgaaagaattactcacaccgctactgaccgactacaagctcagcgcaacgcacctaaat
aattttattgacgttactaggggagggccgcaacactttcttctgaataatctgctccat
ttcccgcaggctatcagcccgaatgccgcctacggctcggccctgcaccaagcgttgcac
cgtgcacatagccaccgccgggcaacccacaaggcaaaaccaatcgaggacattctgcac
gacttccaatcagagcttagttcgatgcacctagcagcgcacgagtacgaacagttcctc
cgtagaggcgaagatgcgctagagacgttcctaggcgaatgctatgagacattcactgac
acgcaattaagtgagcagaattttaacagccagcagagcttctgtggcagcgcgcacttg
actggcaaactcgacttggtcgacatcgatgagacaactaaaacaattgtcgtaactgac
tacaagaccggcaagccgagtagtgcctggcgcggtaaaacggactacgaaaagatcaag
ctgcacaaatataggcagcagttgatgttctataagcttttaatcgaaaactcacgcagc
taccacaattatgaagtacgcgaagggcgcatccagttcgtcgaaccgacgcctgacggc
acgatataccggctcgacctgacgtttgatcaaaaagagctagaccgcttcgctcgtttg
gttgaagctatttacggtaaaattaccgccctcgacctacccgatagtaccgcctatgca
gccacctaccaaggcattctcgattttgaagatagtttactcgtcgaataa
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integrated database retrieval system
