Fluviispira sanaruensis: JCM31447_00880
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Entry
JCM31447_00880 CDS
T05949
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03030
DNA replication
sbf03430
Mismatch repair
sbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM31447_00880
03430 Mismatch repair
JCM31447_00880
03440 Homologous recombination
JCM31447_00880
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbf03032
]
JCM31447_00880
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_00880
Enzymes [BR:
sbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM31447_00880
DNA replication proteins [BR:
sbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM31447_00880
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM31447_00880
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
DEDDh_C
RNase_H_2
UvrC_RNaseH
DUF496
AI2M-like_HNH
Motif
Other DBs
NCBI-ProteinID:
BBH51671
UniProt:
A0A4P2VGF5
LinkDB
All DBs
Position
complement(98299..100227)
Genome browser
AA seq
642 aa
AA seq
DB search
MTFQNKHNRSFKPGFKTLRKEQTLPTEIIANPNRPQWISRLPAQIDIVFFDLETTGGNPQ
NSSIIEIGAIKYKHGKEVGRFETLVNPKRNIPNIVQKITHINNEMIKNAPTLEEIFDDFI
NFIGDSVIVAHGAQGDIAYLVHHMRELKNLEFKNFYFCTHLIVSNILPEMPSKTLSGVAE
YFEIPVLDAHKALDDAEMTSSVFWKLLEVCERNGFKTCEDLFKIQADAETVRKLGPGINP
TIVDNIPTTPGILYILNSHHEISYITASVNLRKSLQQLTEISLDKEMNRIVVDASGFKFE
RTNNLLESLIKEKRELKRLSLSIDPRKSQSRSENFLQIFIPEDMLEYARDYPHKVPFIIP
QHEEIHNGEFLEEETYVEENKINNNLYATFGEQDDTVIPITKTRRILSISRSDKFKILRR
RNHSIESCVRIGHLKEGVGYCFGPFAQPKAVLQEVQELLKHFPIEFNNFTMQERFAHLRV
IISLLNGNIEQEIKKIERENKKINALKNFSNYLRNLKLIKDINQISEYFNKNYMSNIPKS
GLCLISNNDFKEFDVAVVVRGRVAKKSRLPFEQGDRLKSPRYFTRLFENYYDEIMAPLSP
IVFTDDHCSDMELFSYWLQNKKGEGEWVEFSELEPLFNTTLL
NT seq
1929 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcaaaataagcacaaccgctcatttaagcctggatttaaaaccctgcgaaaa
gagcagacccttcccacagaaatcatagcgaatccaaaccgtccgcaatggatcagccgt
ttgccagcgcaaattgatattgtgtttttcgatcttgaaactacgggtgggaatccacaa
aatagttcaattatcgaaattggtgcgattaaatacaaacatggcaaagaagttgggcgt
tttgaaacattagtaaatcccaaaagaaatattccaaatatcgtgcaaaaaatcactcat
attaataatgaaatgatcaaaaacgcgccaaccttggaagaaatttttgatgactttata
aatttcattggagattctgttatagttgcacacggtgcccaaggtgatattgcttattta
gttcatcatatgagagaattaaaaaacttagaatttaaaaacttttatttctgcacacat
ctcatcgtttcaaatattttaccagaaatgccttcaaaaacattatcaggggttgctgaa
tattttgaaatacctgtattagacgcccacaaggcactcgatgatgctgaaatgacctca
tcggttttctggaaattacttgaagtttgcgaaagaaatggctttaaaacctgcgaagac
ctttttaaaatacaagccgacgcagaaactgtccgtaagcttggtccgggaataaatccc
acgatcgtggacaatattccgaccacacccggtatactttatatattaaattctcatcat
gaaatttcatatatcactgcaagtgtaaatttaagaaaatcattacagcaattaacagaa
attagtttagacaaagagatgaatcgtatagttgtcgacgcctctggatttaaatttgag
cgtacgaataatttattagaatctctcattaaagaaaaacgtgaattaaagcgtctttca
ctttcaatagatccacgaaaaagtcaaagcagaagcgaaaattttttacaaatttttatt
cctgaagatatgcttgaatatgcacgagattatcctcataaagtgcctttcattattcct
caacatgaagaaattcataatggggagtttttggaagaagaaacttatgtagaagaaaat
aaaataaataataatctctatgcaacttttggtgaacaggatgacacagtcattccaatt
acaaaaacaagacgtattttaagtatttcgcgttccgacaaattcaaaatattgagacgc
agaaatcattccattgaatcatgtgtgcgcataggacatttaaaagaaggcgtaggctat
tgttttggcccatttgcccaacccaaagccgtgttacaagaagtgcaagaactgctcaaa
cattttccaatagaatttaacaactttactatgcaggaaagatttgcgcatttgagagtt
attatttctcttttaaatggaaatattgagcaagaaattaagaaaattgaaagagaaaat
aaaaaaatcaatgctctaaaaaatttctcaaattaccttcgtaatttaaaactcataaaa
gatatcaatcaaatttctgagtactttaataaaaattatatgagcaatattcctaaatca
ggtctttgccttatctcaaataacgattttaaagaatttgacgttgccgttgtcgtccgt
ggcagagtggctaaaaagagtcgccttccttttgaacaaggcgatcgtctcaaaagccct
cgttactttacaaggctctttgaaaattattacgacgaaatcatggctcctctttcgcca
attgtttttaccgatgaccactgctcagacatggaattattttcatattggctgcagaat
aaaaaaggagaaggagagtgggttgaattctcagaattagagcctttgtttaatacgact
ttattgtaa
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