Fluviispira sanaruensis: JCM31447_01920
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Entry
JCM31447_01920 CDS
T05949
Name
(GenBank) hypothetical protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03420
Nucleotide excision repair
sbf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM31447_01920
03430 Mismatch repair
JCM31447_01920
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_01920
Enzymes [BR:
sbf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
JCM31447_01920
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM31447_01920
MMR (mismatch excision repair)
Other MMR factors
JCM31447_01920
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
AAA_11
AAA_22
Tail_spike_N
Motif
Other DBs
NCBI-ProteinID:
BBH51774
UniProt:
A0A4P2VIR7
LinkDB
All DBs
Position
complement(219929..221941)
Genome browser
AA seq
670 aa
AA seq
DB search
MQHILNQLNNEQKEAVISSKGALLVLAGAGTGKTKVITSRIAWMIHSGVRPESIVAVSFT
NKAAKEMQERLASLVGERLAKKVELSTFHSFALKLLRSNHAEFGLQKDFSISDESESKNL
LRESIREFHLEDILSLQEAAQKISHFKDCLYNDEDFQLKKNIFDSKILKQLFNSYNRRLR
LYNLVDFDDIVYLAVNGFKRNPNLLEKVQDNISFIMVDEYQDTSHSQFEFICMLSSKSRN
VCVVGDDDQSIYSWRGAKPSVISDFLLSFPEAKKVTLEQNYRCSPNILNAANSVIRENTE
RLGKELWSQQENKYSIIIQECENERDEALFVAENILKLRSSCPNFNLDQIAILVRSNSQS
LPLEQVLTEKKIPYHIHGGTQFFDRKEVRDLFSYLKFAHNSSDLNSLFRILNLPSRGIGI
ATLEKIKDIFLQSQKIKSNASFLDSLKFFSNTHKGVWEFVHLWDNFGAKLKYSEGIVDIS
SALRQCYENIGLKKDILVSSANMQIAQFRMDIVDRVLKVIEKLELEKENIQSVIDALHLD
EAKFESANDTSGKVQILTIHSSKGLEFPNVFIIGVEEGILPHERSIAVKNGEQEERRLFY
VAITRAKYRLYISHCGFRKKGRSCNSEREPKPSRFLSAIPKDLVEFCRTDPQSEEARRME
AARKLFELFR
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgcagcatatattaaatcaacttaataatgagcaaaaagaagctgttatttcctccaaa
ggagcattacttgttttggcaggagcaggaactggtaaaacaaaagttattacttcgcgc
attgcttggatgattcattcaggagtgcgcccagaaagtattgtggcagtcagttttacc
aataaagctgcaaaagaaatgcaagagagactagcttcactcgtcggtgaaagattagca
aaaaaagtagaactatcaacttttcactcatttgccttaaaattgctgagaagcaatcac
gctgaatttggcttacaaaaagatttttcaatttccgatgaaagtgaaagcaaaaatctt
ttacgtgaatctattcgcgagtttcatcttgaagatatactttctctccaagaagctgcg
caaaaaatttcacattttaaagattgtctctataatgatgaagattttcaactcaaaaaa
aatatattcgatagcaaaattttaaagcaattatttaactcgtacaatcgtagattaaga
ttatataatttagttgattttgatgatattgtttacttagctgtcaatggattcaaaaga
aatcccaatcttttagaaaaagttcaagacaatatttcatttattatggttgatgagtat
caagacacaagtcattcacaatttgaatttatttgcatgctctcatcaaaatcaagaaat
gtatgcgttgttggagatgatgatcaaagtatttattcatggcgaggagcaaaaccatcc
gtcatttctgatttcttattatcatttcccgaagcaaaaaaagtaaccttagaacaaaat
taccgttgcagtccaaatatcctaaacgcggcaaatagtgtgatcagagaaaatacggag
agattaggaaaagaattatggagccagcaagaaaataaatactcaattattattcaagaa
tgcgaaaacgagagagatgaagcactttttgttgcagaaaatatattaaaactaagatca
tcctgtccgaattttaaccttgatcaaatcgcaattttagtgaggtccaacagtcaatca
cttccacttgaacaagttttgactgaaaaaaagatcccttaccacatacatggtggcact
caattctttgatcgcaaagaagttcgagatctcttttcttatttaaaattcgcacataat
agttcagatttaaacagcttatttcgcatattaaatttaccttcaagaggaattggtata
gcaactcttgaaaaaattaaagatatatttttacaatctcagaaaataaaatcgaatgct
tcttttttggattctttaaaatttttttccaatacacacaaaggggtttgggaatttgtg
cacttatgggataattttggtgcaaaactaaaatactcagaaggaatagttgatatttca
tctgctctaagacaatgttatgagaatattggcctgaaaaaagatattttagtatcttct
gctaatatgcagattgcacaatttcgtatggatatcgtagatagagtattaaaagttata
gaaaagcttgaactcgaaaaagaaaatatacaatctgtaattgatgcactccatcttgat
gaagcaaaatttgagtctgcaaacgatacttctgggaaagtacagatcttgacgattcac
tcatctaaaggacttgagtttccaaatgtttttattattggtgtagaagaaggaattttg
ccgcatgaaagaagtattgcagttaaaaacggtgaacaagaagaacgaagattattttac
gttgccataacgcgggctaaatatagattgtatatttctcattgtggattccgaaaaaaa
ggtcgttcttgtaactcagaaagagagccaaagccatcccgctttttatctgcaatacca
aaggatttagtagaattttgcagaaccgatcctcaatcagaagaagcgagaagaatggaa
gctgcaaggaaattatttgaactttttcggtaa
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