Fluviispira sanaruensis: JCM31447_05190
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Entry
JCM31447_05190 CDS
T05949
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03030
DNA replication
sbf03430
Mismatch repair
sbf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
JCM31447_05190
03430 Mismatch repair
JCM31447_05190
03440 Homologous recombination
JCM31447_05190
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbf03032
]
JCM31447_05190
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_05190
Enzymes [BR:
sbf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
JCM31447_05190
DNA replication proteins [BR:
sbf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
JCM31447_05190
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
JCM31447_05190
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti-like
tRNA_anti_2
DUF6821
Motif
Other DBs
NCBI-ProteinID:
BBH52082
UniProt:
A0A4P2VT81
LinkDB
All DBs
Position
complement(584645..588304)
Genome browser
AA seq
1219 aa
AA seq
DB search
MQPEEFVHLHIHSEYSLLDGSIKVKKLVKELSKRGVKAAALTDHDAMHGVLEFYLSCQAE
KINGIIGYEINVECIYLENKKQVSHLILLAENDEGYANLIKLCTIANTTGKNNVYTDSTS
VTFADIERHSKGLICLTSCMKGELSAHILNNDEKSAQFYLDKLIQIFGKENLFVELIDNG
ITEQKELIPKLAQLAKNNEINIVASADVHYINKRDKETHMSLLAIKHKLQKSDVRGIPSS
IDFHLPTFEEMQLKFSAYPDALLNTKKIADRCQVKIDTKSIFMPDYRQRENETSDDCLVR
LSRSGLEARKSAVAHWMGQSFNEDVWDEYKKRLEYELSVILKMKFSGYFLIVQDFINWAK
EQKIPVGPGRGSAAGSIVTYSLRITNIDPIRFNLLFERFLNPDRISMPDIDTDFCQDRRG
DVLNYVYQKYGNRAVSQIVTFGRMMAKNALKNLARINGWFFHESNEFAKLIPESPGITLE
QAIKEEVKIQERLDSDERARNLWESALEVEGTLSSLGIHAAGVIISDRALDERCPLLETD
GQLLTQFENKYAEKIGLIKFDFLGLKTLTVIDNAVKLTQKRHNIEIDIDSIELEDPKVYE
MISTAHVTGIFQLESNGMRKLIANLKPTCFTDIIAVLALFRPGPLGSGMVDDFVKRKHGE
TQVEYPFSELEPILSDTYGVIVYQEQVQKIAAVLANYSLGEADLLRRAMGKKDKNEMERQ
KSRFVSGATENGHDPQKAADLFDLMAKFAEYGFNKSHTAAYGWVTYQTAWLKTYYPTEFM
TAIMTCDLDNTDKIVGYVRDCKRMKIAIRPPCVNYSRFEFSIPGDKIIQFGLGAVKGLGS
GIINMIVEEREKNGIFATVPEFIARLDARKLNKKVMESLIKAGAFDAIASNRAELMANSD
TWLKTIAKEAEREESTSFDIFAMFTEESPAIKAKVSGENNNPKIENNKKNQSDFVFLPNI
LPTKVRSENCPTKIANTLLPIQIKPTRPWTFYEQLAHEFATLGFYMSGHPADLIRADLKE
ISEISLDQAILYLDPDEVPDYKRKTVKVAGIVTLNLEKKNKDGNAFLVLKLEDGYGELEV
TLFSKQYAALTESVKIGDALVVECKIKKGIEDGTVKGIVQSIDRVSNKRIELVKRIILAT
EENFIKNKENLQKLIQILITNKGKTPLYMDISIPNHKLRLKAKMGNHYVTPTDNFILDIE
NAWPGLVRVERVYHYQIAE
NT seq
3660 nt
NT seq
+upstream
nt +downstream
nt
gtgcagccagaagaatttgtccacctccatatccattccgagtactcccttcttgacggc
tccataaaagtcaaaaaattagtaaaagagctttctaaaagaggggtaaaagcggctgca
ctcacggaccatgatgctatgcatggtgtgcttgaattctatctctcttgtcaggcagaa
aaaataaatggcattattggctatgaaataaatgttgagtgcatttatcttgaaaataag
aagcaagtttctcatttaattttacttgctgaaaatgatgaaggttacgcaaatctaatc
aagctatgcacaattgcgaatacaacaggaaaaaataatgtatatacggactctacatct
gttactttcgcagatatagaacgccactcaaagggattaatttgtttaacaagctgtatg
aaaggtgaactttctgcgcatatattaaataatgacgaaaagagtgcgcaattttatctc
gataaattgattcagatattcggaaaagaaaatctttttgtagaactaattgacaatgga
atcacagaacaaaaagaactgattccaaaactcgctcaattagcaaaaaataatgaaatc
aatatcgttgcatctgcagatgtgcattatattaataaaagagataaagaaacccatatg
tctttgcttgcaattaaacataaattgcaaaaatcggatgtaagaggcattccaagttct
atagattttcatttgccaacatttgaagagatgcaattaaaattctctgcttatcccgat
gctcttctaaataccaaaaaaatagcggatagatgtcaggttaaaatcgacacaaaaagt
atatttatgcctgattatcggcaaagagaaaatgaaacctccgatgactgccttgtccga
ctttcacgctcaggccttgaagcacgcaaaagcgcagttgcccattggatgggtcaatct
tttaatgaagatgtttgggatgaatataaaaaacgcctcgaatatgaactctctgtgatc
ttaaaaatgaaattttcgggctatttcttaatcgtgcaagactttatcaattgggcaaaa
gaacaaaaaatacctgttggacctggacgaggttctgccgccggcagtattgttacttat
tctttgcgcatcacaaatatcgatcccatccgctttaatctcttatttgaacgcttttta
aatccagaccgtatttcgatgcccgatattgacacggacttttgccaagatagacgtgga
gatgttcttaattatgtctatcaaaaatatggcaatcgagccgtctcccaaatagttaca
tttggacgaatgatggctaaaaatgcgctcaaaaatcttgcgcggatcaatggctggttt
tttcatgagagcaacgaatttgccaaattgattcctgagtcccctggcatcactctcgaa
caagccattaaagaagaagttaaaattcaagaaagacttgattccgatgaacgcgcaagg
aatttatgggaaagcgctcttgaagtggaaggcaccctcagttctcttgggatacatgcc
gctggagtaattatatctgatcgcgctctcgatgaacgttgccctttgcttgaaacagat
ggacaacttctgactcaatttgaaaataaatatgccgaaaaaattggtctcataaaattt
gactttttaggattaaaaactcttacagttatagataatgctgtaaagctaactcaaaaa
agacataatatagaaattgatatcgacagtattgaactcgaagatcctaaagtttacgaa
atgatttcgacggcccatgtgacaggaatctttcagcttgagtccaatggtatgcgtaaa
ctcattgctaacttaaagccgacctgtttcacagatatcattgcggttcttgccctcttt
cgccctgggcctttgggttctggcatggttgacgattttgtcaaacgcaaacatggtgaa
acgcaagttgagtacccattttctgaacttgaacccattttaagtgacacttatggagtc
atcgtttatcaagaacaggtgcaaaaaatcgccgcagttttggctaattattcacttggt
gaagctgacttattaagacgcgccatgggtaaaaaagataaaaatgaaatggagcgacaa
aagagtcgttttgtctcaggtgcaacagaaaatggccacgatccacaaaaagccgccgat
ctctttgacctcatggcaaaatttgctgaatatggctttaataaaagtcacaccgcagcc
tatggctgggtaacataccaaactgcatggctaaaaacatattacccaacagaatttatg
accgcaattatgacgtgtgacttagataacaccgacaaaattgttggttacgttcgtgat
tgtaagagaatgaaaattgccattcgtcctccttgtgtcaattattcacgtttcgaattt
agcattccaggtgataaaataattcaatttggcttaggcgctgttaaaggactcggctct
ggcataatcaatatgatcgtcgaagaacgcgaaaaaaatggtatctttgccactgtccca
gaatttattgcccgcttagatgcaagaaaattaaataaaaaagtaatggaaagccttatt
aaggcaggcgcatttgacgcaattgccagcaatcgagccgagcttatggccaactcagat
acatggctcaagactattgcaaaagaagctgagcgtgaagaaagtaccagttttgatata
tttgctatgtttacagaagagtcgccagcgataaaagcaaaagtatcaggagaaaataat
aatcctaaaatagaaaataataagaaaaaccaaagcgactttgtatttctccccaatatt
cttccaacaaaagtgcgatcggaaaattgtccgacaaaaatagcgaatacactcttgcct
attcaaataaaaccaacgcgcccatggacattttatgagcaattggcccatgaatttgcc
acccttgggttttatatgtcaggtcatccagcagatcttattcgcgccgatctaaaagag
atctcagaaatttctctagatcaagccattctttatttagatccagatgaagttcctgac
tataaaagaaaaacagttaaagttgccggcattgttactttaaatctagagaaaaaaaat
aaagacggcaatgcttttttagttctcaaattagaagatggctatggtgaacttgaagtg
acattattcagcaaacaatatgctgcactcactgagtcggttaaaataggcgatgcactc
gttgtagaatgtaaaatcaaaaaaggtattgaggatggtacagttaaaggtattgtccaa
agcattgatcgcgtttccaacaaacgaattgaacttgtaaaaagaattattcttgctact
gaagaaaactttattaagaacaaggaaaacttacaaaagcttattcaaattcttataaca
aataaaggtaaaacacctctatatatggatatctctataccaaatcataagctcagatta
aaagcaaaaatgggaaatcactacgtcacaccaacagataattttattttagatattgaa
aacgcttggcctggattagtacgagtcgaacgggtttatcactatcagatagcggaatag
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