Fluviispira sanaruensis: JCM31447_12940
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Entry
JCM31447_12940 CDS
T05949
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
sbf
Fluviispira sanaruensis
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_12940
Enzymes [BR:
sbf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
JCM31447_12940
DNA repair and recombination proteins [BR:
sbf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
JCM31447_12940
Prokaryotic type
JCM31447_12940
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
ASNSD1-SEP
Motif
Other DBs
NCBI-ProteinID:
BBH52851
UniProt:
A0A4P2VJH3
LinkDB
All DBs
Position
1470586..1471992
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AA seq
468 aa
AA seq
DB search
MQFRKTIVWLRRDLRLEDNIALSKACEMSENVLPLFVFDSNILSKIKNKEDRRVQFIYET
LLQLKEDLNNKGKDILILYGKPEVEIPKIAINLNVDALFCNKDYENYAYTRDHSVKKQLQ
AHNIQFFAFKDQVIFEEKEILNKQAQPYQVFTPYKRAWLAMYQREKIKEAKYKIDKLFSL
QSLNGFNSTLSLTDIGFKAIHLQFKIGRAGGIECLQNFATKLSHYHETRDLFAVEGTSRL
SVHLRFGTLSIRELFHFAEKNHSQGSDIWQAELIWREFYKMILCQFPYVEEQCFKQQCVN
IQWHDNPEYFEKWKNGMTGFPIIDAAMRQFNQTGWMHNRLRMIVASFLTKDLLLDYRKGE
EYFADNLIDFDLSSNNGGWQWCASTGCDAQPYFRVFNPAAQSKKFDPSGAFIRKYCPELK
LLDDRYIHEPINSPEKVLTSAQCRLGIDYPKPIVQHDIQRLKAMNLFH
NT seq
1407 nt
NT seq
+upstream
nt +downstream
nt
ttgcaatttagaaaaactatcgtttggcttagacgagatttacgtttagaagataatatc
gctttgagtaaagcttgtgaaatgtctgaaaatgttcttccgctgttcgtttttgattcg
aatattttgagtaaaataaagaataaagaagatagaagagtccagtttatttatgaaact
ttgcttcaattgaaagaggatcttaataataaggggaaagatatattaattttatatgga
aaacccgaagtagaaatcccaaaaattgcgataaatttaaatgtcgacgctctcttttgt
aataaagattatgagaattatgcgtatacgagagatcattccgtaaagaaacaactgcaa
gcacacaatatccaattctttgcatttaaagatcaagtgatttttgaagaaaaagaaatt
ttaaataaacaagctcagccctaccaagtatttactccctataaaagagcttggttagct
atgtatcaaagggaaaagattaaagaggcaaagtataaaattgataaattattttcattg
cagagtctaaatggattcaattcaactctatcccttacagatattggttttaaagcaatt
catctgcagtttaaaatcgggcgagcgggaggtatcgaatgtctgcagaattttgcaact
aaattgagccattatcatgagacgagggatctttttgctgtggaagggacttcacgacta
tcagtgcatttgcgctttggtactttatccattcgagaactttttcactttgccgagaaa
aatcattcacaaggatctgatatttggcaagcggagctgatttggcgagaattttataag
atgatcctctgtcaatttccttatgtagaagaacaatgttttaagcagcagtgtgtaaat
atacagtggcatgacaatcctgagtattttgaaaagtggaaaaatgggatgactggtttt
cccatcatcgatgccgcaatgcgccagtttaaccaaacaggttggatgcacaatcgattg
cgtatgattgtagcatcttttttaactaaagatctcttattagattatagaaaaggcgaa
gaatattttgctgataatttgatcgattttgacttatcatccaacaatggcggatggcag
tggtgtgcgtcaacgggttgcgatgctcaaccttattttagagtttttaacccagcagct
caatccaagaaatttgatcccagtggagcttttatccgtaaatattgtcccgaactaaaa
ttattggatgatagatatattcatgagccaataaattcccctgaaaaggttttaacttca
gctcagtgcagattaggaatagattatcccaaaccaattgttcaacacgatattcagcgt
ttaaaagcaatgaatctgtttcattaa
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