Fluviispira sanaruensis: JCM31447_13970
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Entry
JCM31447_13970 CDS
T05949
Name
(GenBank) excinuclease ABC subunit UvrB
KO
K03702
excinuclease ABC subunit B
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
JCM31447_13970
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbf03400
]
JCM31447_13970
DNA repair and recombination proteins [BR:
sbf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
JCM31447_13970
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
JCM31447_13970
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
FtsK_SpoIIIE
HH_RND_rel
Kinesin
AAA_22
AAA_30
UB2H
DUF7998
AAA_5
DUF6715
Motif
Other DBs
NCBI-ProteinID:
BBH52954
UniProt:
A0A4P2VLT8
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All DBs
Position
1592582..1594627
Genome browser
AA seq
681 aa
AA seq
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MSNEKFETKWPLEPMGDQPQAIQKLVSGIQNGIAEQVLLGVTGSGKTFTVANVIAQTQKP
TLVIAHNKTLAAQLFQEFKELFPKSAVEYFVSYYDYYQPEAYVPSTDTFIDKTATINEDI
DKMRHSATRALFERRDVIIVSSVSCIYGLGEPESYLNARILLEKGMNLSRDDFIRHLLAI
QFNRNDISLERGKFRVRGDIVEIVPTYEKEKAIRIQFWGEEIEKISFIDALRGTVIENIN
KVGIYPATHYVLEQEKIENIIAEITKDLLERLNLFKENGKFLEAQRIEQRTLHDIEMFRE
IGYCQGVENYSRYLDGRKEGEPPSTLLDYFPKDYLLVIDESHVTVPQIGGMYRGDRARKE
TLVNYGFRLPSALDNRPLNFEEFTARMGQTIYVSATPAKYELEKSGNEVVEQVIRPTGLI
DPIIVVKPAQGQIDNLLMEIQQTVSRKFRVLVTTLTKKMAEEITHYLSEFKIKVKYLHSE
IHSIERVEILRDLRLGVFDVLVGINLLREGLDLPEVELVAILDADKEGFLRSRTSLIQTV
GRAARNANGRVILYADKETESIKFCLAETERRRKIQLQYNEENDITPQTILKKIPENLRK
LYNLDYGDEYQEKLLQAVSHLEDLNILHSPKKLDKHIQKLIKEMQKASQKMEFEFAAELR
DKINILKEQLLILSGDLNGTQ
NT seq
2046 nt
NT seq
+upstream
nt +downstream
nt
atgagcaacgagaaatttgaaacaaaatggcctcttgagccaatgggtgatcaaccacaa
gcaatacaaaaattggtcagtggtattcagaatggaattgctgagcaagttttgcttggt
gtgacaggctccggcaaaacatttaccgttgccaatgttatcgctcagacgcaaaaacca
actctcgtcatagcgcacaataaaaccctcgcagcccagctttttcaagaatttaaagaa
ctctttccaaagagtgctgtcgaatattttgtgagttattatgattattatcaaccagag
gcttatgttccaagtacagatacctttatagataaaacagcaacgattaacgaagatatc
gataaaatgaggcacagtgccacccgcgcattatttgagcgacgagatgttattattgta
agctctgtcagctgtatatatggtttaggagagcctgagtcatatttaaatgcccgcatt
ttacttgagaaaggaatgaatttatcgcgagacgattttattcgacatttgcttgcaatt
caattcaatcgcaatgatatttccttagaacgcggaaaatttagagtgcgtggtgatatt
gttgagattgttcctacgtatgaaaaagaaaaagcaatacgtatacaattctggggcgag
gaaatcgagaaaatatcttttattgatgcattgcgcggaacagtaatagaaaatataaat
aaagtaggaatttatcctgcaacccattatgttcttgaacaggaaaaaattgaaaacatt
attgcagaaattactaaagatctcctagagcggttaaatctttttaaagaaaatggaaag
tttttagaagcgcaaagaattgagcagagaacattacacgatatcgaaatgtttcgtgaa
ataggatattgtcaaggagtagaaaattattcccgttaccttgatggacggaaagaagga
gaaccaccttcgactttgctggattattttccaaaagattatcttttagtcatcgatgaa
agtcatgttacagttcctcaaattggtggaatgtatcgaggtgaccgcgcacgtaaagaa
actttggtgaattatggatttcgtttgccatctgcattagacaatcgacctctcaatttt
gaagaatttactgctagaatggggcagacgatttatgtctctgcgacaccggctaaatat
gaattggaaaaatcgggtaatgaagtcgtggaacaagttattcgtcctacaggacttatc
gatcctattattgttgtaaaaccagcacaagggcagattgataatctattaatggaaatt
cagcaaacagtctctagaaaatttcgggtgcttgttacgactttaacaaaaaaaatggca
gaagaaattacccattatttgtctgaatttaaaattaaagttaaatatttacattcagaa
attcacagtattgagcgtgtagaaattttacgcgatttacgcttaggagtatttgatgtt
ctggttggaatcaatttattacgtgaggggctagaccttcctgaagtggaattggttgca
atcctcgatgccgataaagaaggttttttaagaagtagaacaagcctaatccaaacagta
ggaagggcagcaagaaatgcaaatggtagagtaattttatacgcagataaagaaactgag
agtataaaattttgtttagcagagactgaaagaagaagaaaaattcagctgcaatataat
gaagaaaacgatattacaccgcaaacaattcttaaaaaaattccagaaaatttacggaag
ctttataatttagattacggtgatgaatatcaagaaaaactactacaagcagtttctcat
ttagaagatctcaacattttacacagtcccaaaaaacttgataagcatattcaaaaactg
attaaagaaatgcaaaaagcttcgcaaaaaatggaatttgaatttgctgcagaattaagg
gataaaataaatatattaaaagagcagttattaattctttcaggtgatttaaatggaact
cagtga
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