Fluviispira sanaruensis: JCM31447_22390
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Entry
JCM31447_22390 CDS
T05949
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
sbf
Fluviispira sanaruensis
Pathway
sbf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sbf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
JCM31447_22390 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sbf03019
]
JCM31447_22390 (rny)
Messenger RNA biogenesis [BR:
sbf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
JCM31447_22390 (rny)
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Gene cluster
GFIT
Motif
Pfam:
HD
HDOD
RNase_Y_N
DUF5957
GlcV_C_terminal
ERM_helical
FtsX
ADIP
Motif
Other DBs
NCBI-ProteinID:
BBH53789
UniProt:
A0A4P2VPN8
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Position
complement(2600010..2601596)
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AA seq
528 aa
AA seq
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MHWSVFTLIGALIGLIGGVVLAKLFAIRSLTSLGEIPVKENMDAILKSAEAQRNMILEEA
LLATREQYQVEASRLESEHELVIGMQENFEQELNEKQSEVDKLANEIEKKEELNNQKKLQ
IDKVKEDLDVKAHLNVDLQKNLLIQLEHKIGRNKSELFHDMRLDLINSEKLGITRWLMDN
NETLKVDAQKFARNSLNSVYLRYQPNFIWPKSSFIVQVSSKDLLQKYFHEESPIISSLIT
NTDSTISVLTINDELPSMLKISGGSGVDKEVIRLTLEEMVAKDIFNEDRIRPIFDKHKRT
IDRHVAKIGEEAIKHLGITPNIHPEILKLIGSLNYRTSHRQNQYYHSIEVARLAGMIAEE
VGVNPIIAKRAGILHDIGKALDYKIEGSHAVISGDYATRFGESEEVVDTVLAHHDDKIVE
TPYAYILKAADAMSGARPGARVDMEEGYHRRIDGISGVVNSFQEQGVTGSAIMHAGREVH
VFVDNNKVKQKDISGLAEGIAKKLESEVEFPGQIRVTVIRRTEITEVA
NT seq
1587 nt
NT seq
+upstream
nt +downstream
nt
atgcattggtctgtcttcacccttatcggtgctcttattgggttaatcggcggggtggtt
ctcgctaaattatttgctattcgctcactgacaagccttggtgaaatacctgtaaaagag
aatatggacgcaatcttaaaaagtgctgaagcgcaacgcaatatgatcctcgaagaagca
cttttagcaacccgcgagcaataccaagttgaggccagtcgccttgaaagtgaacatgag
cttgtgattggtatgcaagaaaactttgaacaagaattgaacgaaaagcaatctgaagtc
gataaattggctaacgagattgaaaaaaaagaagaactcaacaatcaaaaaaaactacag
attgataaagtcaaagaagatctcgatgtaaaagctcatttgaacgttgatttacaaaaa
aatcttttaattcaactcgagcataagattggcagaaataaatccgaactgtttcatgat
atgcgccttgatctcataaatagtgaaaaactcgggattacacgttggttaatggacaac
aatgaaactctaaaagtggacgcacaaaagtttgcccgtaactccttgaattctgtttat
ttgcgctaccaacccaattttatttggccaaaatcatcctttattgtccaagttagctct
aaagatctcttgcaaaaatattttcatgaagagtcgcccattatttcttctctcattaca
aataccgactctactatcagtgttttaacgatcaacgacgagcttccttctatgctcaaa
atttcaggtggttctggcgtcgataaagaagttattcgcctgacccttgaagaaatggtt
gcgaaagatatttttaatgaagacagaatcagacctatttttgataaacataaaagaaca
attgatagacatgtagcaaaaattggtgaagaagccataaaacatctcggtattacaccg
aatatccatcctgaaattttaaaattaattggttccttgaattacagaacaagccataga
caaaatcaatattatcattctatcgaagtggctcgcttggctggtatgattgcggaagaa
gtaggtgtgaatcctattatcgctaaaagagccggaatattgcatgatatcggtaaagct
ctcgactataaaatcgaagggagccatgcggttatcagcggtgattatgctacgcgtttt
ggcgagtccgaagaagtcgttgacacagtgctcgcgcaccatgacgataaaatcgtagaa
actccatacgcttatattttaaaagcagcagatgctatgtccggagctagaccaggcgca
cgggtcgatatggaagaaggctatcacagacgtattgatggaatttcaggtgtagtcaat
agcttccaagaacaaggtgttacaggatctgctattatgcatgccggacgtgaagtgcat
gttttcgttgataataacaaagtaaaacaaaaagatatctctggactagctgagggaatt
gctaagaaattagaatctgaagtcgagtttccagggcaaattagagtcacagtcattcgc
cgcacagaaatcactgaggttgcctaa
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